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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170030833
CDYI01029887
196621
Bacillota
GTC
Asp
>WENV170030531
CDYI01017212
158247
Bacillota
>WENV170031435
CDYI01055133
158247
Bacillota
>WENV170030364
CDYI01009858
144612
Bacillota
TCT
Arg
>WENV170030935
CDYI01034060
144612
Bacillota
TCT
Arg
>WENV170031041
CDYI01037902
144612
Bacillota
TCT
Arg
>WENV170030860
CDYI01030761
235098
Bacillota
GAC
Val
>WENV170031231
CDYI01046693
235098
Bacillota
GAC
Val
>WENV170030275
CDYI01006367
338152
Bacillota
TTC
Glu
>WENV170030496
CDYI01015901
148239
Bacillota
TCT
Arg
>WENV170030306
CDYI01007653
44854
Bacillota
TGA
Ser
>WENV170030314
CDYI01008242
304022
Bacillota
GCC
Gly
>WENV170030834
CDYI01029887
304022
Bacillota
GCC
Gly
>WENV170030640
CDYI01022464
307003
Bacillota
TGC
Ala
>WENV170030623
CDYI01021650
59312
Bacillota
CAG
Leu
>WENV170030635
CDYI01022090
238910
Bacillota
CTT
Lys
>WENV170031402
CDYI01053270
238910
Bacillota
CTT
Lys
>WENV170030177
CDYI01001936
338147
Bacillota
CTC
Glu
>WENV170030551
CDYI01018235
338147
Bacillota
CTC
Glu
>WENV170031176
CDYI01044383
338147
Bacillota
CTC
Glu
>WENV170030212
CDYI01004130
235137
Bacillota
TGC
Ala
>WENV170030192
CDYI01002895
235114
Bacillota
TTT
Lys
>WENV170030414
CDYI01012973
235114
Bacillota
TTT
Lys
>WENV170031178
CDYI01044434
144668
Bacillota
GTC
Asp
>WENV170031316
CDYI01050380
144668
Bacillota
GTC
Asp
>WENV170030377
CDYI01011127
429429
Bacillota
CCA
Trp
>WENV170030913
CDYI01033134
429429
Bacillota
CCA
Trp
>WENV170031321
CDYI01050380
313454
Bacillota
GAA
Phe
>WENV170030647
CDYI01022485
44859
Bacillota
AAG
Leu
>WENV170030648
CDYI01022485
44859
Bacillota
AAG
Leu
>WENV170030497
CDYI01015901
156937
Bacillota
GTG
His
>WENV170031544
CDYI01059772
245298
Bacillota
CGG
Pro
>WENV170031485
CDYI01058012
37269
Bacillota
TGA
Ser
>WENV170031386
CDYI01052820
169968
Bacillota
CAT
Met
>WENV170030515
CDYI01016406
100326
Bacillota
GTA
Tyr
>WENV170030620
CDYI01021510
100326
Bacillota
GTA
Tyr
>WENV170030828
CDYI01029553
144610
Bacillota
GTG
His
>WENV170030190
CDYI01002895
144610
Bacillota
GTG
His
>WENV170030386
CDYI01011956
411547
Bacillota
CTG
Gln
>WENV170031543
CDYI01059772
411547
Bacillota
CTG
Gln
>WENV170030307
CDYI01007653
4624
Bacillota
GCT
Ser
>WENV170031162
CDYI01043877
263765
Bacillota
TAC
Val
>WENV170031322
CDYI01050380
313164
Bacillota
TTT
Lys
>WENV170031360
CDYI01051432
313164
Bacillota
TTT
Lys
>WENV170030781
CDYI01028333
235095
Bacillota
GGT
Thr
>WENV170031221
CDYI01046357
253195
Bacillota
TTT
Lys
>WENV170030285
CDYI01006889
411549
Bacillota
TTG
Gln
>WENV170030221
CDYI01004327
235142
Bacillota
CTT
Lys
>WENV170031122
CDYI01042055
235142
Bacillota
CTT
Lys
>WENV170030612
CDYI01020917
148188
Bacillota
CCG
Arg
>WENV170031424
CDYI01054462
148188
Bacillota
CCG
Arg
>WENV170030757
CDYI01026969
243401
Bacillota
CGT
Thr
>WENV170031357
CDYI01051432
147674
Bacillota
TCT
Arg
>WENV170030196
CDYI01003420
241432
Bacillota
TGT
Thr
>WENV170030276
CDYI01006367
241432
Bacillota
TGT
Thr
>WENV170030341
CDYI01009134
235124
Bacillota
TGG
Pro
>WENV170031281
CDYI01048933
235124
Bacillota
TGG
Pro
>WENV170031232
CDYI01046749
338129
Bacillota
TGT
Thr
>WENV170030303
CDYI01007577
144583
Bacillota
ACG
Arg
>WENV170030408
CDYI01012973
144652
Bacillota
GTC
Asp
>WENV170030998
CDYI01036664
144652
Bacillota
GTC
Asp
>WENV170031439
CDYI01055228
247734
Bacillota
TGC
Ala
>WENV170030445
CDYI01014359
144621
Bacillota
GTT
Asn
>WENV170030853
CDYI01030427
144621
Bacillota
GTT
Asn
>WENV170030413
CDYI01012973
235113
Bacillota
GAA
Phe
>WENV170030415
CDYI01012980
235113
Bacillota
GAA
Phe
>WENV170030467
CDYI01015248
58712
Bacillota
CAG
Leu
>WENV170030756
CDYI01026910
245296
Bacillota
CCC
Gly
>WENV170031013
CDYI01037140
245296
Bacillota
CCC
Gly
>WENV170031477
CDYI01057427
245296
Bacillota
CCC
Gly
>WENV170030257
CDYI01005944
415519
Bacillota
GCA
Cys
>WENV170030432
CDYI01013425
198135
Bacillota
GAT
Ile
>WENV170030602
CDYI01020701
178024
Bacillota
TCT
Arg
>WENV170030431
CDYI01013425
299139
Bacillota
TGC
Ala
>WENV170031425
CDYI01054539
144594
Bacillota
CAC
Val
>WENV170031510
CDYI01058708
144594
Bacillota
CAC
Val
>WENV170030411
CDYI01012973
95563
Bacillota
GTA
Tyr
>WENV170030443
CDYI01013931
95563
Bacillota
GTA
Tyr
>WENV170030643
CDYI01022471
413179
Bacillota
CCC
Gly
>WENV170030506
CDYI01016231
338128
Bacillota
TTC
Glu
>WENV170031168
CDYI01044068
338128
Bacillota
TTC
Glu
>WENV170031520
CDYI01058965
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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