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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170032742
CDYK01011336
202812
Bacillota
CAT
Met
>WENV170032523
CDYK01005555
309417
Bacillota
GGC
Ala
>WENV170033899
CDYK01035903
309417
Bacillota
GGC
Ala
>WENV170032911
CDYK01014648
37213
Bacillota
TGA
Ser
>WENV170032452
CDYK01003606
144612
Bacillota
TCT
Arg
>WENV170033707
CDYK01031614
144612
Bacillota
TCT
Arg
>WENV170032916
CDYK01014653
267649
Bacillota
TAC
Val
>WENV170033841
CDYK01034159
267649
Bacillota
TAC
Val
>WENV170034185
CDYK01041695
339890
Bacillota
TTG
Gln
>WENV170033078
CDYK01018443
235098
Bacillota
GAC
Val
>WENV170033851
CDYK01034387
235098
Bacillota
GAC
Val
>WENV170033900
CDYK01035906
235098
Bacillota
GAC
Val
>WENV170034357
CDYK01046021
235098
Bacillota
GAC
Val
>WENV170032867
CDYK01014127
148239
Bacillota
TCT
Arg
>WENV170032513
CDYK01005270
44854
Bacillota
TGA
Ser
>WENV170032658
CDYK01009351
44854
Bacillota
TGA
Ser
>WENV170032874
CDYK01014173
44854
Bacillota
TGA
Ser
>WENV170033532
CDYK01027083
44854
Bacillota
TGA
Ser
>WENV170033344
CDYK01023439
144577
Bacillota
GAT
Ile
>WENV170033578
CDYK01028502
304022
Bacillota
GCC
Gly
>WENV170033868
CDYK01035178
304022
Bacillota
GCC
Gly
>WENV170033942
CDYK01036965
304022
Bacillota
GCC
Gly
>WENV170033971
CDYK01037354
304022
Bacillota
GCC
Gly
>WENV170032334
CDYK01000671
307003
Bacillota
TGC
Ala
>WENV170032440
CDYK01003030
338147
Bacillota
CTC
Glu
>WENV170033294
CDYK01022294
338147
Bacillota
CTC
Glu
>WENV170033659
CDYK01030761
338147
Bacillota
CTC
Glu
>WENV170034052
CDYK01039195
338147
Bacillota
CTC
Glu
>WENV170032837
CDYK01013169
235150
Bacillota
TGC
Ala
>WENV170032451
CDYK01003604
235150
Bacillota
TGC
Ala
>WENV170032722
CDYK01011016
235150
Bacillota
TGC
Ala
>WENV170033825
CDYK01033747
198770
Bacillota
GTC
Asp
>WENV170033599
CDYK01028928
429429
Bacillota
CCA
Trp
>WENV170033830
CDYK01033747
313454
Bacillota
GAA
Phe
>WENV170033254
CDYK01021626
44859
Bacillota
AAG
Leu
>WENV170032541
CDYK01005980
11034
Bacillota
GGA
Ser
>WENV170032542
CDYK01005980
11034
Bacillota
GGA
Ser
>WENV170032943
CDYK01015208
11034
Bacillota
GGA
Ser
>WENV170033579
CDYK01028502
235117
Bacillota
TAC
Val
>WENV170033869
CDYK01035178
235117
Bacillota
TAC
Val
>WENV170032868
CDYK01014127
156937
Bacillota
GTG
His
>WENV170033217
CDYK01021199
235079
Bacillota
GAA
Phe
>WENV170032589
CDYK01007173
235079
Bacillota
GAA
Phe
>WENV170033001
CDYK01017010
338149
Bacillota
CTC
Glu
>WENV170032336
CDYK01000686
245298
Bacillota
CGG
Pro
>WENV170032780
CDYK01012097
245298
Bacillota
CGG
Pro
>WENV170033094
CDYK01018734
245298
Bacillota
CGG
Pro
>WENV170033917
CDYK01036267
37269
Bacillota
TGA
Ser
>WENV170032464
CDYK01003633
169968
Bacillota
CAT
Met
>WENV170033634
CDYK01029994
169968
Bacillota
CAT
Met
>WENV170033829
CDYK01033747
169968
Bacillota
CAT
Met
>WENV170033215
CDYK01021199
235078
Bacillota
TAC
Val
>WENV170032933
CDYK01014983
144610
Bacillota
GTG
His
>WENV170032335
CDYK01000686
411547
Bacillota
CTG
Gln
>WENV170032502
CDYK01004882
411547
Bacillota
CTG
Gln
>WENV170032777
CDYK01012086
411547
Bacillota
CTG
Gln
>WENV170033065
CDYK01018037
411547
Bacillota
CTG
Gln
>WENV170033093
CDYK01018734
411547
Bacillota
CTG
Gln
>WENV170033296
CDYK01022373
411547
Bacillota
CTG
Gln
>WENV170032514
CDYK01005270
4624
Bacillota
GCT
Ser
>WENV170033533
CDYK01027083
4624
Bacillota
GCT
Ser
>WENV170034333
CDYK01045296
4624
Bacillota
GCT
Ser
>WENV170033202
CDYK01020938
263765
Bacillota
TAC
Val
>WENV170033115
CDYK01019467
235095
Bacillota
GGT
Thr
>WENV170033116
CDYK01019467
235095
Bacillota
GGT
Thr
>WENV170033390
CDYK01024182
253195
Bacillota
TTT
Lys
>WENV170032439
CDYK01003021
411549
Bacillota
TTG
Gln
>WENV170032973
CDYK01016314
411549
Bacillota
TTG
Gln
>WENV170033943
CDYK01037007
411549
Bacillota
TTG
Gln
>WENV170032934
CDYK01014999
235142
Bacillota
CTT
Lys
>WENV170033711
CDYK01031868
235142
Bacillota
CTT
Lys
>WENV170032818
CDYK01012872
148188
Bacillota
CCG
Arg
>WENV170033817
CDYK01033666
148188
Bacillota
CCG
Arg
>WENV170034250
CDYK01043378
148188
Bacillota
CCG
Arg
>WENV170033398
CDYK01024182
243401
Bacillota
CGT
Thr
>WENV170033503
CDYK01026718
298620
Bacillota
CAT
Met
>WENV170033608
CDYK01028999
235124
Bacillota
TGG
Pro
>WENV170034162
CDYK01041109
338129
Bacillota
TGT
Thr
>WENV170033612
CDYK01029312
157838
Bacillota
GTC
Asp
>WENV170034367
CDYK01046081
157838
Bacillota
GTC
Asp
>WENV170032538
CDYK01005973
144583
Bacillota
ACG
Arg
>WENV170034205
CDYK01042373
247734
Bacillota
TGC
Ala
>WENV170032720
CDYK01010967
144621
Bacillota
GTT
Asn
>WENV170033002
CDYK01017010
144621
Bacillota
GTT
Asn
>WENV170034231
CDYK01042554
144621
Bacillota
GTT
Asn
>WENV170034169
CDYK01041357
235113
Bacillota
GAA
Phe
>WENV170032522
CDYK01005496
58712
Bacillota
CAG
Leu
>WENV170033470
CDYK01025982
58712
Bacillota
CAG
Leu
>WENV170033058
CDYK01017728
245296
Bacillota
CCC
Gly
>WENV170033345
CDYK01023450
245296
Bacillota
CCC
Gly
>WENV170033381
CDYK01024181
272992
Bacillota
CTT
Lys
>WENV170032474
CDYK01003650
415519
Bacillota
GCA
Cys
>WENV170032989
CDYK01016399
248965
Bacillota
GCC
Gly
>WENV170033397
CDYK01024182
178024
Bacillota
TCT
Arg
>WENV170032607
CDYK01007881
144594
Bacillota
CAC
Val
>WENV170033486
CDYK01026303
144594
Bacillota
CAC
Val
>WENV170033835
CDYK01033984
144594
Bacillota
CAC
Val
>WENV170032528
CDYK01005662
95563
Bacillota
GTA
Tyr
>WENV170032764
CDYK01011771
338127
Bacillota
TTG
Gln
>WENV170034042
CDYK01039188
413179
Bacillota
CCC
Gly
>WENV170032816
CDYK01012843
338128
Bacillota
TTC
Glu
>WENV170033487
CDYK01026334
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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