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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170034394
CDYL01002074
144612
Bacillota
TCT
Arg
>WENV170034559
CDYL01009944
267649
Bacillota
TAC
Val
>WENV170034843
CDYL01024821
267649
Bacillota
TAC
Val
>WENV170034515
CDYL01007048
235098
Bacillota
GAC
Val
>WENV170034620
CDYL01014019
235098
Bacillota
GAC
Val
>WENV170034820
CDYL01023969
235098
Bacillota
GAC
Val
>WENV170034731
CDYL01019498
148239
Bacillota
TCT
Arg
>WENV170034461
CDYL01004835
44854
Bacillota
TGA
Ser
>WENV170034532
CDYL01008319
235150
Bacillota
TGC
Ala
>WENV170034610
CDYL01013464
235150
Bacillota
TGC
Ala
>WENV170034644
CDYL01015286
235150
Bacillota
TGC
Ala
>WENV170034945
CDYL01028374
235150
Bacillota
TGC
Ala
>WENV170034599
CDYL01013223
235137
Bacillota
TGC
Ala
>WENV170034958
CDYL01029328
429429
Bacillota
CCA
Trp
>WENV170034775
CDYL01021798
11034
Bacillota
GGA
Ser
>WENV170034732
CDYL01019498
156937
Bacillota
GTG
His
>WENV170034597
CDYL01012940
274189
Bacillota
TGT
Thr
>WENV170035011
CDYL01032177
274189
Bacillota
TGT
Thr
>WENV170034770
CDYL01021341
16266
Bacillota
GCT
Ser
>WENV170034380
CDYL01001268
338149
Bacillota
CTC
Glu
>WENV170034707
CDYL01018372
338149
Bacillota
CTC
Glu
>WENV170035017
CDYL01032474
338149
Bacillota
CTC
Glu
>WENV170034622
CDYL01014028
245298
Bacillota
CGG
Pro
>WENV170034566
CDYL01010256
37269
Bacillota
TGA
Ser
>WENV170034852
CDYL01025321
287000
Bacillota
GTT
Asn
>WENV170034606
CDYL01013462
169968
Bacillota
CAT
Met
>WENV170034457
CDYL01004585
413152
Bacillota
TCC
Gly
>WENV170034541
CDYL01009068
153911
Bacillota
GAT
Ile
>WENV170034674
CDYL01016610
100326
Bacillota
GTA
Tyr
>WENV170034415
CDYL01003016
411547
Bacillota
CTG
Gln
>WENV170034621
CDYL01014028
411547
Bacillota
CTG
Gln
>WENV170034663
CDYL01016350
411547
Bacillota
CTG
Gln
>WENV170034462
CDYL01004835
4624
Bacillota
GCT
Ser
>WENV170034502
CDYL01006499
235095
Bacillota
GGT
Thr
>WENV170034576
CDYL01010867
411549
Bacillota
TTG
Gln
>WENV170034892
CDYL01026328
148188
Bacillota
CCG
Arg
>WENV170034405
CDYL01002451
80612
Bacillota
GTA
Tyr
>WENV170034993
CDYL01031416
80612
Bacillota
GTA
Tyr
>WENV170034516
CDYL01007234
235124
Bacillota
TGG
Pro
>WENV170034717
CDYL01019062
345314
Bacillota
TTG
Gln
>WENV170034406
CDYL01002453
338129
Bacillota
TGT
Thr
>WENV170034464
CDYL01004860
144583
Bacillota
ACG
Arg
>WENV170034403
CDYL01002402
235171
Bacillota
CCA
Trp
>WENV170034381
CDYL01001268
144621
Bacillota
GTT
Asn
>WENV170034435
CDYL01004098
58712
Bacillota
CAG
Leu
>WENV170034501
CDYL01006447
58712
Bacillota
CAG
Leu
>WENV170034676
CDYL01016882
245296
Bacillota
CCC
Gly
>WENV170034708
CDYL01018372
272992
Bacillota
CTT
Lys
>WENV170034919
CDYL01027298
144594
Bacillota
CAC
Val
>WENV170034472
CDYL01004914
272488
Bacillota
GAA
Phe
>WENV170034607
CDYL01013462
272488
Bacillota
GAA
Phe
>WENV170034766
CDYL01021076
272488
Bacillota
GAA
Phe
>WENV170034831
CDYL01024500
114075
Bacillota
TAG
Leu
>WENV170034839
CDYL01024791
273862
Bacillota
TGC
Ala
>WENV170034836
CDYL01024782
338128
Bacillota
TTC
Glu
>WENV170034967
CDYL01030015
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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