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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037231
CDYQ01003043
24650
Bacillota
TAA
Leu
>WENV170037333
CDYQ01008320
196621
Bacillota
GTC
Asp
>WENV170037744
CDYQ01024553
196621
Bacillota
GTC
Asp
>WENV170037499
CDYQ01014422
158247
Bacillota
>WENV170037294
CDYQ01006256
155113
Bacillota
CGG
Pro
>WENV170038081
CDYQ01037284
144612
Bacillota
TCT
Arg
>WENV170038167
CDYQ01040368
144612
Bacillota
TCT
Arg
>WENV170037447
CDYQ01013473
235098
Bacillota
GAC
Val
>WENV170037878
CDYQ01031112
235098
Bacillota
GAC
Val
>WENV170037533
CDYQ01016264
148239
Bacillota
TCT
Arg
>WENV170037729
CDYQ01023928
235154
Bacillota
GTT
Asn
>WENV170037393
CDYQ01011062
59312
Bacillota
CAG
Leu
>WENV170037598
CDYQ01018950
59312
Bacillota
CAG
Leu
>WENV170037275
CDYQ01005507
338147
Bacillota
CTC
Glu
>WENV170037610
CDYQ01019561
338147
Bacillota
CTC
Glu
>WENV170037925
CDYQ01032345
338147
Bacillota
CTC
Glu
>WENV170038177
CDYQ01040895
338147
Bacillota
CTC
Glu
>WENV170038180
CDYQ01040899
338147
Bacillota
CTC
Glu
>WENV170037223
CDYQ01003027
235150
Bacillota
TGC
Ala
>WENV170037671
CDYQ01022106
235150
Bacillota
TGC
Ala
>WENV170037196
CDYQ01001815
235294
Bacillota
TGC
Ala
>WENV170037456
CDYQ01013598
235114
Bacillota
TTT
Lys
>WENV170037980
CDYQ01033885
235114
Bacillota
TTT
Lys
>WENV170037818
CDYQ01028565
41154
Bacillota
TAA
Leu
>WENV170037392
CDYQ01011062
44859
Bacillota
AAG
Leu
>WENV170037783
CDYQ01026789
44859
Bacillota
AAG
Leu
>WENV170037429
CDYQ01012989
11034
Bacillota
GGA
Ser
>WENV170037515
CDYQ01015545
274189
Bacillota
TGT
Thr
>WENV170037745
CDYQ01024553
235079
Bacillota
GAA
Phe
>WENV170037984
CDYQ01034423
235087
Bacillota
TGC
Ala
>WENV170037613
CDYQ01019765
338149
Bacillota
CTC
Glu
>WENV170038069
CDYQ01037179
338149
Bacillota
CTC
Glu
>WENV170037741
CDYQ01024323
271471
Bacillota
GCC
Gly
>WENV170037922
CDYQ01032341
271471
Bacillota
GCC
Gly
>WENV170037862
CDYQ01030198
245298
Bacillota
CGG
Pro
>WENV170037618
CDYQ01019959
155089
Bacillota
CAT
Met
>WENV170037411
CDYQ01012383
413152
Bacillota
TCC
Gly
>WENV170038169
CDYQ01040536
100326
Bacillota
GTA
Tyr
>WENV170037454
CDYQ01013598
144610
Bacillota
GTG
His
>WENV170037534
CDYQ01016264
144610
Bacillota
GTG
His
>WENV170037931
CDYQ01032442
144610
Bacillota
GTG
His
>WENV170037344
CDYQ01008688
411547
Bacillota
CTG
Gln
>WENV170037446
CDYQ01013351
411547
Bacillota
CTG
Gln
>WENV170037861
CDYQ01030198
411547
Bacillota
CTG
Gln
>WENV170037334
CDYQ01008320
235095
Bacillota
GGT
Thr
>WENV170037518
CDYQ01015549
235095
Bacillota
GGT
Thr
>WENV170037626
CDYQ01020099
411549
Bacillota
TTG
Gln
>WENV170037701
CDYQ01023027
235142
Bacillota
CTT
Lys
>WENV170037759
CDYQ01025389
235142
Bacillota
CTT
Lys
>WENV170038034
CDYQ01036191
235142
Bacillota
CTT
Lys
>WENV170037374
CDYQ01009880
80612
Bacillota
GTA
Tyr
>WENV170037901
CDYQ01031658
256380
Bacillota
>WENV170037933
CDYQ01032442
235127
Bacillota
TTT
Lys
>WENV170037267
CDYQ01005049
144583
Bacillota
ACG
Arg
>WENV170037621
CDYQ01019972
144652
Bacillota
GTC
Asp
>WENV170037974
CDYQ01033885
144652
Bacillota
GTC
Asp
>WENV170037843
CDYQ01029327
235171
Bacillota
CCA
Trp
>WENV170037614
CDYQ01019765
144621
Bacillota
GTT
Asn
>WENV170038041
CDYQ01036449
144621
Bacillota
GTT
Asn
>WENV170037979
CDYQ01033885
235113
Bacillota
GAA
Phe
>WENV170037753
CDYQ01025016
58712
Bacillota
CAG
Leu
>WENV170037758
CDYQ01025386
245296
Bacillota
CCC
Gly
>WENV170037550
CDYQ01016996
272992
Bacillota
CTT
Lys
>WENV170038070
CDYQ01037179
272992
Bacillota
CTT
Lys
>WENV170037548
CDYQ01016812
144594
Bacillota
CAC
Val
>WENV170037977
CDYQ01033885
95563
Bacillota
GTA
Tyr
>WENV170038159
CDYQ01040136
95563
Bacillota
GTA
Tyr
>WENV170037271
CDYQ01005196
414486
Bacillota
CCC
Gly
>WENV170037177
CDYQ01000275
114075
Bacillota
TAG
Leu
>WENV170038137
CDYQ01039361
238945
Bacillota
GCC
Gly
>WENV170038138
CDYQ01039361
238945
Bacillota
GCC
Gly
>WENV170037822
CDYQ01028712
273862
Bacillota
TGC
Ala
>WENV170037301
CDYQ01006556
338128
Bacillota
TTC
Glu
>WENV170037717
CDYQ01023684
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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