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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037728
CDYQ01023927
235097
Bacteroidota
TTT
Lys
>WENV170038011
CDYQ01035504
235097
Bacteroidota
TTT
Lys
>WENV170038162
CDYQ01040148
235097
Bacteroidota
TTT
Lys
>WENV170038215
CDYQ01042344
235102
Bacteroidota
CGT
Thr
>WENV170038220
CDYQ01042613
235102
Bacteroidota
CGT
Thr
>WENV170037439
CDYQ01013179
144657
Bacteroidota
CGG
Pro
>WENV170037493
CDYQ01014010
243025
Bacteroidota
CAT
Met
>WENV170037672
CDYQ01022114
97336
Bacteroidota
CAG
Leu
>WENV170037431
CDYQ01013014
338155
Bacteroidota
CTC
Glu
>WENV170037435
CDYQ01013170
58715
Bacteroidota
GAG
Leu
>WENV170037811
CDYQ01028329
17323
Bacteroidota
GGA
Ser
>WENV170037336
CDYQ01008333
338486
Bacteroidota
CAT
Met
>WENV170038000
CDYQ01035092
413663
Bacteroidota
CTG
Gln
>WENV170037458
CDYQ01013604
415410
Bacteroidota
TTG
Gln
>WENV170037743
CDYQ01024340
415410
Bacteroidota
TTG
Gln
>WENV170038030
CDYQ01036183
136244
Bacteroidota
TAC
Val
>WENV170038031
CDYQ01036183
136244
Bacteroidota
TAC
Val
>WENV170037719
CDYQ01023696
144695
Bacteroidota
CAT
Met
>WENV170037273
CDYQ01005248
341950
Bacteroidota
>WENV170037705
CDYQ01023299
338124
Bacteroidota
CCG
Arg
>WENV170038181
CDYQ01040906
338124
Bacteroidota
CCG
Arg
>WENV170037353
CDYQ01008997
238121
Bacteroidota
CTT
Lys
>WENV170037354
CDYQ01008997
238121
Bacteroidota
CTT
Lys
>WENV170037355
CDYQ01008997
238121
Bacteroidota
CTT
Lys
>WENV170037368
CDYQ01009716
126641
Bacteroidota
TAC
Val
>WENV170037369
CDYQ01009716
126641
Bacteroidota
TAC
Val
>WENV170037219
CDYQ01002672
338132
Bacteroidota
GCA
Cys
>WENV170037306
CDYQ01006636
338132
Bacteroidota
GCA
Cys
>WENV170037580
CDYQ01017891
338132
Bacteroidota
GCA
Cys
>WENV170037629
CDYQ01020339
338132
Bacteroidota
GCA
Cys
>WENV170037685
CDYQ01022238
338132
Bacteroidota
GCA
Cys
>WENV170037945
CDYQ01032764
338132
Bacteroidota
GCA
Cys
>WENV170037389
CDYQ01010656
193809
Bacteroidota
CAT
Met
>WENV170037662
CDYQ01021751
193809
Bacteroidota
CAT
Met
>WENV170037987
CDYQ01034443
37076
Bacteroidota
TAA
Leu
>WENV170038044
CDYQ01036534
144933
Bacteroidota
TCT
Arg
>WENV170037696
CDYQ01022755
144656
Bacteroidota
GTG
His
>WENV170037813
CDYQ01028334
235207
Bacteroidota
CAT
Met
>WENV170038248
CDYQ01043767
235207
Bacteroidota
CAT
Met
>WENV170037659
CDYQ01021433
144596
Bacteroidota
GGC
Ala
>WENV170037226
CDYQ01003037
80607
Bacteroidota
GTA
Tyr
>WENV170037410
CDYQ01012378
80607
Bacteroidota
GTA
Tyr
>WENV170037763
CDYQ01025771
80607
Bacteroidota
GTA
Tyr
>WENV170037434
CDYQ01013170
113604
Bacteroidota
>WENV170037846
CDYQ01029439
113604
Bacteroidota
>WENV170037848
CDYQ01029439
113604
Bacteroidota
>WENV170038203
CDYQ01041999
113604
Bacteroidota
>WENV170037438
CDYQ01013177
344769
Bacteroidota
CTC
Glu
>WENV170037866
CDYQ01030555
16999
Bacteroidota
GGA
Ser
>WENV170037388
CDYQ01010647
80614
Bacteroidota
>WENV170037364
CDYQ01009645
52358
Bacteroidota
TGA
Ser
>WENV170037628
CDYQ01020334
52358
Bacteroidota
TGA
Ser
>WENV170038058
CDYQ01036920
52358
Bacteroidota
TGA
Ser
>WENV170038211
CDYQ01042022
154643
Bacteroidota
CAT
Met
>WENV170038089
CDYQ01037914
415558
Bacteroidota
TTG
Gln
>WENV170037815
CDYQ01028367
144590
Bacteroidota
GTT
Asn
>WENV170037816
CDYQ01028367
144590
Bacteroidota
GTT
Asn
>WENV170037642
CDYQ01020741
95559
Bacteroidota
TAG
Leu
>WENV170037281
CDYQ01005928
419272
Bacteroidota
CTG
Gln
>WENV170038182
CDYQ01041280
419272
Bacteroidota
CTG
Gln
>WENV170037500
CDYQ01014583
144655
Bacteroidota
GGC
Ala
>WENV170038020
CDYQ01035787
95875
Bacteroidota
TAG
Leu
>WENV170038245
CDYQ01043753
240012
Bacteroidota
CCC
Gly
>WENV170037962
CDYQ01033871
44852
Bacteroidota
TAA
Leu
>WENV170037765
CDYQ01025923
354570
Bacteroidota
TTC
Glu
>WENV170037916
CDYQ01032337
238606
Bacteroidota
CGG
Pro
>WENV170037791
CDYQ01027154
132360
Bacteroidota
GGG
Pro
>WENV170037305
CDYQ01006632
425638
Bacteroidota
CTG
Gln
>WENV170038198
CDYQ01041669
425638
Bacteroidota
CTG
Gln
>WENV170037767
CDYQ01026041
239647
Bacteroidota
TTT
Lys
>WENV170037282
CDYQ01005928
19317
Bacteroidota
GGA
Ser
>WENV170037893
CDYQ01031638
353927
Bacteroidota
TTC
Glu
>WENV170037665
CDYQ01021783
185921
Bacteroidota
GTC
Asp
>WENV170037430
CDYQ01013014
23696
Bacteroidota
GCT
Ser
>WENV170037542
CDYQ01016614
414426
Bacteroidota
CTG
Gln
>WENV170038160
CDYQ01040146
414426
Bacteroidota
CTG
Gln
>WENV170037673
CDYQ01022114
59498
Bacteroidota
GAG
Leu
>WENV170037697
CDYQ01022755
16224
Bacteroidota
GGA
Ser
>WENV170038276
CDYQ01044900
16220
Bacteroidota
GGA
Ser
>WENV170037820
CDYQ01028708
338125
Bacteroidota
CCT
Arg
>WENV170037775
CDYQ01026471
338125
Bacteroidota
CCT
Arg
>WENV170037172
CDYQ01000002
235129
Bacteroidota
GCC
Gly
>WENV170037174
CDYQ01000002
235129
Bacteroidota
GCC
Gly
>WENV170037589
CDYQ01018553
235129
Bacteroidota
GCC
Gly
>WENV170037591
CDYQ01018553
235129
Bacteroidota
GCC
Gly
>WENV170037661
CDYQ01021457
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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