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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170038478
CDYR01009369
158247
Bacillota
>WENV170038827
CDYR01021856
144612
Bacillota
TCT
Arg
>WENV170039149
CDYR01033936
144612
Bacillota
TCT
Arg
>WENV170039575
CDYR01048432
144612
Bacillota
TCT
Arg
>WENV170039387
CDYR01041651
235098
Bacillota
GAC
Val
>WENV170039440
CDYR01043476
148239
Bacillota
TCT
Arg
>WENV170038560
CDYR01012852
44854
Bacillota
TGA
Ser
>WENV170039014
CDYR01029864
37071
Bacillota
TGA
Ser
>WENV170038318
CDYR01002406
304022
Bacillota
GCC
Gly
>WENV170038613
CDYR01015261
304022
Bacillota
GCC
Gly
>WENV170038325
CDYR01002500
59312
Bacillota
CAG
Leu
>WENV170038726
CDYR01019117
59312
Bacillota
CAG
Leu
>WENV170038986
CDYR01028661
238910
Bacillota
CTT
Lys
>WENV170039342
CDYR01039884
238910
Bacillota
CTT
Lys
>WENV170038918
CDYR01026033
338147
Bacillota
CTC
Glu
>WENV170039296
CDYR01038199
338147
Bacillota
CTC
Glu
>WENV170039571
CDYR01048037
338147
Bacillota
CTC
Glu
>WENV170039595
CDYR01048965
235137
Bacillota
TGC
Ala
>WENV170039211
CDYR01035399
235114
Bacillota
TTT
Lys
>WENV170039228
CDYR01035724
235114
Bacillota
TTT
Lys
>WENV170038949
CDYR01027255
429429
Bacillota
CCA
Trp
>WENV170038299
CDYR01001595
44859
Bacillota
AAG
Leu
>WENV170038324
CDYR01002500
44859
Bacillota
AAG
Leu
>WENV170038752
CDYR01019779
11034
Bacillota
GGA
Ser
>WENV170038317
CDYR01002406
235079
Bacillota
GAA
Phe
>WENV170038603
CDYR01014780
173314
Bacillota
GAT
Ile
>WENV170038696
CDYR01018191
155089
Bacillota
CAT
Met
>WENV170038676
CDYR01017785
144599
Bacillota
GTC
Asp
>WENV170038945
CDYR01027232
153911
Bacillota
GAT
Ile
>WENV170038415
CDYR01006813
100326
Bacillota
GTA
Tyr
>WENV170038825
CDYR01021822
100326
Bacillota
GTA
Tyr
>WENV170039226
CDYR01035724
144610
Bacillota
GTG
His
>WENV170039441
CDYR01043476
144610
Bacillota
GTG
His
>WENV170039174
CDYR01035102
263765
Bacillota
TAC
Val
>WENV170038284
CDYR01000162
419639
Bacillota
GCA
Cys
>WENV170038991
CDYR01028664
419639
Bacillota
GCA
Cys
>WENV170038480
CDYR01009568
411549
Bacillota
TTG
Gln
>WENV170039242
CDYR01036123
235142
Bacillota
CTT
Lys
>WENV170039295
CDYR01038199
235142
Bacillota
CTT
Lys
>WENV170038664
CDYR01016903
148188
Bacillota
CCG
Arg
>WENV170038581
CDYR01013896
256380
Bacillota
>WENV170038707
CDYR01018685
256380
Bacillota
>WENV170038778
CDYR01020248
163943
Bacillota
GTC
Asp
>WENV170038899
CDYR01025555
163943
Bacillota
GTC
Asp
>WENV170039205
CDYR01035399
144652
Bacillota
GTC
Asp
>WENV170039219
CDYR01035724
144652
Bacillota
GTC
Asp
>WENV170038391
CDYR01005591
238974
Bacillota
GAA
Phe
>WENV170038925
CDYR01026410
238974
Bacillota
GAA
Phe
>WENV170039069
CDYR01031696
238974
Bacillota
GAA
Phe
>WENV170039253
CDYR01036320
238974
Bacillota
GAA
Phe
>WENV170039641
CDYR01050992
144621
Bacillota
GTT
Asn
>WENV170039015
CDYR01029864
235113
Bacillota
GAA
Phe
>WENV170039210
CDYR01035399
235113
Bacillota
GAA
Phe
>WENV170039140
CDYR01033753
243098
Bacillota
GGT
Thr
>WENV170038283
CDYR01000162
344240
Bacillota
GCC
Gly
>WENV170038395
CDYR01005640
344240
Bacillota
GCC
Gly
>WENV170038806
CDYR01021036
344240
Bacillota
GCC
Gly
>WENV170038988
CDYR01028664
152497
Bacillota
GTC
Asp
>WENV170039453
CDYR01043904
152497
Bacillota
GTC
Asp
>WENV170038392
CDYR01005640
196632
Bacillota
GTC
Asp
>WENV170038394
CDYR01005640
196632
Bacillota
GTC
Asp
>WENV170038797
CDYR01020654
196632
Bacillota
GTC
Asp
>WENV170038728
CDYR01019237
248965
Bacillota
GCC
Gly
>WENV170039682
CDYR01052595
343021
Bacillota
CAT
Met
>WENV170038908
CDYR01025664
144594
Bacillota
CAC
Val
>WENV170038622
CDYR01015271
95563
Bacillota
GTA
Tyr
>WENV170039208
CDYR01035399
95563
Bacillota
GTA
Tyr
>WENV170038794
CDYR01020602
414486
Bacillota
CCC
Gly
>WENV170039572
CDYR01048038
152018
Bacillota
CCT
Arg
>WENV170039444
CDYR01043476
114075
Bacillota
TAG
Leu
>WENV170038924
CDYR01026408
384950
Bacillota
GCC
Gly
>WENV170038990
CDYR01028664
384950
Bacillota
GCC
Gly
>WENV170039454
CDYR01043904
384950
Bacillota
GCC
Gly
>WENV170039265
CDYR01036869
413179
Bacillota
CCC
Gly
>WENV170039189
CDYR01035358
338128
Bacillota
TTC
Glu
>WENV170039029
CDYR01030206
338128
Bacillota
TTC
Glu
>WENV170038393
CDYR01005640
245344
Bacillota
GAA
Phe
>WENV170038798
CDYR01020654
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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