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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040728
CDYS01044378
119661
Verrucomicrobiota
CAA
Leu
>WENV170040783
CDYS01047208
155256
Verrucomicrobiota
TCT
Arg
>WENV170040747
CDYS01045343
246701
Verrucomicrobiota
TTT
Lys
>WENV170040048
CDYS01015626
345141
Verrucomicrobiota
TTG
Gln
>WENV170040771
CDYS01046718
345133
Verrucomicrobiota
GAC
Val
>WENV170040015
CDYS01013734
82054
Verrucomicrobiota
GTA
Tyr
>WENV170039802
CDYS01004149
246677
Verrucomicrobiota
CTT
Lys
>WENV170039803
CDYS01004149
246677
Verrucomicrobiota
CTT
Lys
>WENV170040360
CDYS01029631
344844
Verrucomicrobiota
GCA
Cys
>WENV170040657
CDYS01041543
155264
Verrucomicrobiota
GGG
Pro
>WENV170040599
CDYS01038250
344845
Verrucomicrobiota
CTG
Gln
>WENV170039799
CDYS01004136
128202
Verrucomicrobiota
GTC
Asp
>WENV170040940
CDYS01053531
128202
Verrucomicrobiota
GTC
Asp
>WENV170040658
CDYS01041543
414625
Verrucomicrobiota
CCC
Gly
>WENV170040025
CDYS01014206
46246
Verrucomicrobiota
TGA
Ser
>WENV170040729
CDYS01044378
97755
Verrucomicrobiota
TAG
Leu
>WENV170040087
CDYS01017916
246700
Verrucomicrobiota
TTC
Glu
>WENV170040361
CDYS01029631
246700
Verrucomicrobiota
TTC
Glu
>WENV170040303
CDYS01026228
246687
Verrucomicrobiota
CGC
Ala
>WENV170040659
CDYS01041543
419909
Verrucomicrobiota
TCC
Gly
>WENV170039866
CDYS01007528
344841
Verrucomicrobiota
CAC
Val
>WENV170039865
CDYS01007527
82056
Verrucomicrobiota
TAA
Leu
>WENV170039801
CDYS01004149
344842
Verrucomicrobiota
CGT
Thr
>WENV170040767
CDYS01046326
170105
Verrucomicrobiota
CAT
Met
>WENV170040302
CDYS01026228
345123
Verrucomicrobiota
TGT
Thr
>WENV170040727
CDYS01044378
345110
Verrucomicrobiota
CCT
Arg
>WENV170040088
CDYS01017916
344839
Verrucomicrobiota
GTG
His
>WENV170039800
CDYS01004149
155268
Verrucomicrobiota
CGG
Pro
>WENV170040660
CDYS01041543
246728
Verrucomicrobiota
GAA
Phe
>WENV170040544
CDYS01035604
7256
Verrucomicrobiota
GCT
Ser
>WENV170040354
CDYS01029186
345115
Verrucomicrobiota
CAT
Met
>WENV170040326
CDYS01027387
345119
Verrucomicrobiota
TAC
Val
>WENV170040014
CDYS01013734
345124
Verrucomicrobiota
GTT
Asn
>WENV170040355
CDYS01029186
368497
Verrucomicrobiota
GCC
Gly
>WENV170040607
CDYS01038709
368497
Verrucomicrobiota
GCC
Gly
>WENV170040960
CDYS01054406
345142
Verrucomicrobiota
CCG
Arg
>WENV170040089
CDYS01017916
246709
Verrucomicrobiota
CAT
Met
>WENV170040661
CDYS01041543
154693
Verrucomicrobiota
TGG
Pro
>WENV170040769
CDYS01046717
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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