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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041067
CDYT01000668
158247
Bacillota
>WENV170041263
CDYT01006527
144612
Bacillota
TCT
Arg
>WENV170041798
CDYT01023784
144577
Bacillota
GAT
Ile
>WENV170041719
CDYT01021316
307003
Bacillota
TGC
Ala
>WENV170041388
CDYT01010588
338147
Bacillota
CTC
Glu
>WENV170041299
CDYT01008022
173314
Bacillota
GAT
Ile
>WENV170041527
CDYT01013741
144610
Bacillota
GTG
His
>WENV170041606
CDYT01016878
411547
Bacillota
CTG
Gln
>WENV170041680
CDYT01019632
263765
Bacillota
TAC
Val
>WENV170041355
CDYT01009276
411549
Bacillota
TTG
Gln
>WENV170041825
CDYT01025329
411549
Bacillota
TTG
Gln
>WENV170041478
CDYT01012714
235142
Bacillota
CTT
Lys
>WENV170041990
CDYT01031142
235142
Bacillota
CTT
Lys
>WENV170041873
CDYT01027498
256380
Bacillota
>WENV170041897
CDYT01028039
157838
Bacillota
GTC
Asp
>WENV170041491
CDYT01013095
247734
Bacillota
TGC
Ala
>WENV170042081
CDYT01034624
245296
Bacillota
CCC
Gly
>WENV170041617
CDYT01017488
344240
Bacillota
GCC
Gly
>WENV170041156
CDYT01003212
248965
Bacillota
GCC
Gly
>WENV170041580
CDYT01015498
144594
Bacillota
CAC
Val
>WENV170041603
CDYT01016706
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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