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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170045117
CDYX01029737
235146
Actinomycetota
CGT
Thr
>WENV170044627
CDYX01013541
119475
Actinomycetota
TAA
Leu
>WENV170044645
CDYX01014163
235347
Actinomycetota
GGC
Ala
>WENV170045282
CDYX01034124
235153
Actinomycetota
CCT
Arg
>WENV170044928
CDYX01024499
144589
Actinomycetota
ACG
Arg
>WENV170044929
CDYX01024499
144589
Actinomycetota
ACG
Arg
>WENV170045467
CDYX01039441
144589
Actinomycetota
ACG
Arg
>WENV170045468
CDYX01039441
144589
Actinomycetota
ACG
Arg
>WENV170045469
CDYX01039441
144589
Actinomycetota
ACG
Arg
>WENV170044749
CDYX01017957
37070
Actinomycetota
CGA
Ser
>WENV170045592
CDYX01042867
201717
Actinomycetota
CTT
Lys
>WENV170045193
CDYX01031614
144600
Actinomycetota
TGG
Pro
>WENV170044148
CDYX01001000
235092
Actinomycetota
CCG
Arg
>WENV170045356
CDYX01036597
235092
Actinomycetota
CCG
Arg
>WENV170045152
CDYX01030481
235194
Actinomycetota
GTG
His
>WENV170045115
CDYX01029737
273786
Actinomycetota
CGT
Thr
>WENV170044364
CDYX01005951
245301
Actinomycetota
GCC
Gly
>WENV170044717
CDYX01016909
411601
Actinomycetota
CCC
Gly
>WENV170045475
CDYX01039677
23370
Actinomycetota
GCT
Ser
>WENV170044658
CDYX01014292
174149
Actinomycetota
GAT
Ile
>WENV170044878
CDYX01022204
338239
Actinomycetota
TTC
Glu
>WENV170044750
CDYX01017957
16219
Actinomycetota
GCT
Ser
>WENV170044754
CDYX01017957
235174
Actinomycetota
TGC
Ala
>WENV170045133
CDYX01029891
235174
Actinomycetota
TGC
Ala
>WENV170044751
CDYX01017957
235101
Actinomycetota
TTT
Lys
>WENV170044371
CDYX01006163
121510
Actinomycetota
TAA
Leu
>WENV170044747
CDYX01017957
144625
Actinomycetota
GTC
Asp
>WENV170044768
CDYX01017957
144625
Actinomycetota
GTC
Asp
>WENV170044219
CDYX01003051
153948
Actinomycetota
GGG
Pro
>WENV170045217
CDYX01032103
44855
Actinomycetota
TGA
Ser
>WENV170044280
CDYX01004418
235199
Actinomycetota
CAC
Val
>WENV170044596
CDYX01012778
44862
Actinomycetota
CGA
Ser
>WENV170044559
CDYX01010768
44862
Actinomycetota
CGA
Ser
>WENV170045399
CDYX01037431
198659
Actinomycetota
TAC
Val
>WENV170044545
CDYX01010515
413665
Actinomycetota
TTG
Gln
>WENV170045565
CDYX01041618
254857
Actinomycetota
CCG
Arg
>WENV170044626
CDYX01013541
16223
Actinomycetota
GAG
Leu
>WENV170044769
CDYX01017957
144593
Actinomycetota
TAT
Ile
>WENV170045474
CDYX01039677
144700
Actinomycetota
CAT
Met
>WENV170044978
CDYX01026285
144636
Actinomycetota
GAT
Ile
>WENV170044980
CDYX01026285
144636
Actinomycetota
GAT
Ile
>WENV170044764
CDYX01017957
98279
Actinomycetota
GTA
Tyr
>WENV170044443
CDYX01007835
338148
Actinomycetota
CTG
Gln
>WENV170044759
CDYX01017957
338148
Actinomycetota
CTG
Gln
>WENV170044620
CDYX01013541
235148
Actinomycetota
GTT
Asn
>WENV170044630
CDYX01013541
235148
Actinomycetota
GTT
Asn
>WENV170045279
CDYX01033862
53078
Actinomycetota
GGA
Ser
>WENV170044770
CDYX01017957
176456
Actinomycetota
TCT
Arg
>WENV170044218
CDYX01002982
144825
Actinomycetota
CAT
Met
>WENV170044818
CDYX01019544
338139
Actinomycetota
GTT
Asn
>WENV170044757
CDYX01017957
411554
Actinomycetota
CCC
Gly
>WENV170044761
CDYX01017957
113601
Actinomycetota
TAG
Leu
>WENV170045116
CDYX01029737
113601
Actinomycetota
TAG
Leu
>WENV170044628
CDYX01013541
144595
Actinomycetota
CAA
Leu
>WENV170045138
CDYX01029944
144595
Actinomycetota
CAA
Leu
>WENV170044625
CDYX01013541
145343
Actinomycetota
GGG
Pro
>WENV170044825
CDYX01020075
235149
Actinomycetota
CCT
Arg
>WENV170045047
CDYX01027312
235149
Actinomycetota
CCT
Arg
>WENV170045333
CDYX01035259
414234
Actinomycetota
CTG
Gln
>WENV170044760
CDYX01017957
235121
Actinomycetota
CGT
Thr
>WENV170044629
CDYX01013541
144635
Actinomycetota
TGG
Pro
>WENV170044694
CDYX01015789
61501
Actinomycetota
CAG
Leu
>WENV170044138
CDYX01000591
80622
Actinomycetota
CAG
Leu
>WENV170044752
CDYX01017957
80622
Actinomycetota
CAG
Leu
>WENV170044766
CDYX01017957
44851
Actinomycetota
TGA
Ser
>WENV170044681
CDYX01015253
16222
Actinomycetota
GAG
Leu
>WENV170044619
CDYX01013541
235173
Actinomycetota
GGC
Ala
>WENV170044755
CDYX01017957
235173
Actinomycetota
GGC
Ala
>WENV170044372
CDYX01006186
243162
Actinomycetota
GTT
Asn
>WENV170045036
CDYX01027285
243162
Actinomycetota
GTT
Asn
>WENV170044744
CDYX01017957
278447
Actinomycetota
GTG
His
>WENV170045073
CDYX01028042
95593
Actinomycetota
>WENV170045114
CDYX01029572
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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