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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170045328
CDYX01035247
119661
Verrucomicrobiota
CAA
Leu
>WENV170045179
CDYX01031278
155256
Verrucomicrobiota
TCT
Arg
>WENV170045178
CDYX01031278
246701
Verrucomicrobiota
TTT
Lys
>WENV170045200
CDYX01031664
345141
Verrucomicrobiota
TTG
Gln
>WENV170045403
CDYX01037435
345133
Verrucomicrobiota
GAC
Val
>WENV170044864
CDYX01021780
82054
Verrucomicrobiota
GTA
Tyr
>WENV170044395
CDYX01006828
246677
Verrucomicrobiota
CTT
Lys
>WENV170044396
CDYX01006828
246677
Verrucomicrobiota
CTT
Lys
>WENV170044397
CDYX01006828
246677
Verrucomicrobiota
CTT
Lys
>WENV170045104
CDYX01029096
246677
Verrucomicrobiota
CTT
Lys
>WENV170045105
CDYX01029096
246677
Verrucomicrobiota
CTT
Lys
>WENV170045106
CDYX01029096
246677
Verrucomicrobiota
CTT
Lys
>WENV170045559
CDYX01041608
344844
Verrucomicrobiota
GCA
Cys
>WENV170045330
CDYX01035247
155264
Verrucomicrobiota
GGG
Pro
>WENV170045402
CDYX01037435
344845
Verrucomicrobiota
CTG
Gln
>WENV170045181
CDYX01031278
128202
Verrucomicrobiota
GTC
Asp
>WENV170045401
CDYX01037435
128202
Verrucomicrobiota
GTC
Asp
>WENV170045331
CDYX01035247
414625
Verrucomicrobiota
CCC
Gly
>WENV170044617
CDYX01013540
46246
Verrucomicrobiota
TGA
Ser
>WENV170045329
CDYX01035247
97755
Verrucomicrobiota
TAG
Leu
>WENV170044411
CDYX01007092
246700
Verrucomicrobiota
TTC
Glu
>WENV170045560
CDYX01041608
246700
Verrucomicrobiota
TTC
Glu
>WENV170045562
CDYX01041608
246687
Verrucomicrobiota
CGC
Ala
>WENV170045320
CDYX01035247
419909
Verrucomicrobiota
TCC
Gly
>WENV170045199
CDYX01031663
344841
Verrucomicrobiota
CAC
Val
>WENV170045324
CDYX01035247
82056
Verrucomicrobiota
TAA
Leu
>WENV170045103
CDYX01029096
344842
Verrucomicrobiota
CGT
Thr
>WENV170044865
CDYX01021780
170105
Verrucomicrobiota
CAT
Met
>WENV170044806
CDYX01019118
287733
Verrucomicrobiota
CCA
Trp
>WENV170045561
CDYX01041608
345123
Verrucomicrobiota
TGT
Thr
>WENV170045323
CDYX01035247
345110
Verrucomicrobiota
CCT
Arg
>WENV170044412
CDYX01007092
344839
Verrucomicrobiota
GTG
His
>WENV170044259
CDYX01004018
7274
Verrucomicrobiota
CGA
Ser
>WENV170045325
CDYX01035247
246260
Verrucomicrobiota
>WENV170045102
CDYX01029096
155268
Verrucomicrobiota
CGG
Pro
>WENV170045558
CDYX01041608
82181
Verrucomicrobiota
AAG
Leu
>WENV170045321
CDYX01035247
246728
Verrucomicrobiota
GAA
Phe
>WENV170045326
CDYX01035247
7256
Verrucomicrobiota
GCT
Ser
>WENV170044618
CDYX01013540
345115
Verrucomicrobiota
CAT
Met
>WENV170045400
CDYX01037435
345119
Verrucomicrobiota
TAC
Val
>WENV170044863
CDYX01021780
345124
Verrucomicrobiota
GTT
Asn
>WENV170045177
CDYX01031278
17023
Verrucomicrobiota
GGA
Ser
>WENV170044410
CDYX01007092
368497
Verrucomicrobiota
GCC
Gly
>WENV170045197
CDYX01031663
368497
Verrucomicrobiota
GCC
Gly
>WENV170045180
CDYX01031278
345142
Verrucomicrobiota
CCG
Arg
>WENV170044413
CDYX01007092
246709
Verrucomicrobiota
CAT
Met
>WENV170045322
CDYX01035247
154693
Verrucomicrobiota
TGG
Pro
>WENV170044805
CDYX01019118
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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