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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170049033
CDZA01042486
155958
Bacillota
GAT
Ile
>WENV170049536
CDZA01068330
37213
Bacillota
TGA
Ser
>WENV170048948
CDZA01038473
144612
Bacillota
TCT
Arg
>WENV170049077
CDZA01044904
144612
Bacillota
TCT
Arg
>WENV170049679
CDZA01075807
235098
Bacillota
GAC
Val
>WENV170048608
CDZA01021225
148239
Bacillota
TCT
Arg
>WENV170048165
CDZA01000341
44854
Bacillota
TGA
Ser
>WENV170049265
CDZA01053568
44854
Bacillota
TGA
Ser
>WENV170049654
CDZA01074034
241441
Bacillota
GCC
Gly
>WENV170048405
CDZA01011781
59312
Bacillota
CAG
Leu
>WENV170048535
CDZA01018685
235150
Bacillota
TGC
Ala
>WENV170049364
CDZA01058986
11034
Bacillota
GGA
Ser
>WENV170048609
CDZA01021225
156937
Bacillota
GTG
His
>WENV170048677
CDZA01024323
173314
Bacillota
GAT
Ile
>WENV170049444
CDZA01062782
173314
Bacillota
GAT
Ile
>WENV170048678
CDZA01024505
37269
Bacillota
TGA
Ser
>WENV170048894
CDZA01034928
37269
Bacillota
TGA
Ser
>WENV170049107
CDZA01045899
169968
Bacillota
CAT
Met
>WENV170049187
CDZA01049445
169968
Bacillota
CAT
Met
>WENV170048378
CDZA01009957
152149
Bacillota
GTG
His
>WENV170049693
CDZA01076638
152149
Bacillota
GTG
His
>WENV170049441
CDZA01062766
201704
Bacillota
GAT
Ile
>WENV170048593
CDZA01021150
153911
Bacillota
GAT
Ile
>WENV170048166
CDZA01000341
4624
Bacillota
GCT
Ser
>WENV170048338
CDZA01007511
412387
Bacillota
GCA
Cys
>WENV170048337
CDZA01007502
235095
Bacillota
GGT
Thr
>WENV170048854
CDZA01033149
235095
Bacillota
GGT
Thr
>WENV170049553
CDZA01069422
411549
Bacillota
TTG
Gln
>WENV170049582
CDZA01070459
256380
Bacillota
>WENV170048407
CDZA01011794
163943
Bacillota
GTC
Asp
>WENV170048508
CDZA01017571
163943
Bacillota
GTC
Asp
>WENV170048595
CDZA01021213
163943
Bacillota
GTC
Asp
>WENV170049482
CDZA01065832
163943
Bacillota
GTC
Asp
>WENV170048401
CDZA01011645
235124
Bacillota
TGG
Pro
>WENV170049091
CDZA01045185
157838
Bacillota
GTC
Asp
>WENV170048478
CDZA01016155
144583
Bacillota
ACG
Arg
>WENV170049293
CDZA01054797
144583
Bacillota
ACG
Arg
>WENV170049092
CDZA01045185
295033
Bacillota
GAA
Phe
>WENV170048286
CDZA01005783
248965
Bacillota
GCC
Gly
>WENV170049093
CDZA01045185
248965
Bacillota
GCC
Gly
>WENV170049443
CDZA01062782
299139
Bacillota
TGC
Ala
>WENV170049108
CDZA01045899
272488
Bacillota
GAA
Phe
>WENV170049188
CDZA01049445
272488
Bacillota
GAA
Phe
>WENV170049640
CDZA01073507
272488
Bacillota
GAA
Phe
>WENV170049664
CDZA01074760
272488
Bacillota
GAA
Phe
>WENV170048477
CDZA01016150
338128
Bacillota
TTC
Glu
>WENV170048567
CDZA01020370
338128
Bacillota
TTC
Glu
>WENV170048576
CDZA01020501
338128
Bacillota
TTC
Glu
>WENV170048666
CDZA01023887
338128
Bacillota
TTC
Glu
>WENV170049062
CDZA01044235
338128
Bacillota
TTC
Glu
>WENV170049182
CDZA01049393
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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