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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170052060
CDZC01007988
196621
Bacillota
GTC
Asp
>WENV170052189
CDZC01011770
196621
Bacillota
GTC
Asp
>WENV170052791
CDZC01028195
196621
Bacillota
GTC
Asp
>WENV170052904
CDZC01031910
196621
Bacillota
GTC
Asp
>WENV170052906
CDZC01031910
196621
Bacillota
GTC
Asp
>WENV170052360
CDZC01016294
202812
Bacillota
CAT
Met
>WENV170052375
CDZC01016554
202812
Bacillota
CAT
Met
>WENV170052366
CDZC01016545
309417
Bacillota
GGC
Ala
>WENV170052881
CDZC01031421
309417
Bacillota
GGC
Ala
>WENV170052319
CDZC01015401
37213
Bacillota
TGA
Ser
>WENV170052843
CDZC01030510
144612
Bacillota
TCT
Arg
>WENV170051975
CDZC01005521
267649
Bacillota
TAC
Val
>WENV170052108
CDZC01009580
267649
Bacillota
TAC
Val
>WENV170052543
CDZC01021314
267649
Bacillota
TAC
Val
>WENV170052669
CDZC01024330
235098
Bacillota
GAC
Val
>WENV170052933
CDZC01032215
235098
Bacillota
GAC
Val
>WENV170052235
CDZC01013236
44854
Bacillota
TGA
Ser
>WENV170051970
CDZC01005521
235154
Bacillota
GTT
Asn
>WENV170052302
CDZC01015118
241441
Bacillota
GCC
Gly
>WENV170052563
CDZC01021567
241441
Bacillota
GCC
Gly
>WENV170052946
CDZC01032719
144577
Bacillota
GAT
Ile
>WENV170052058
CDZC01007988
304022
Bacillota
GCC
Gly
>WENV170052062
CDZC01007988
304022
Bacillota
GCC
Gly
>WENV170052188
CDZC01011770
304022
Bacillota
GCC
Gly
>WENV170052905
CDZC01031910
304022
Bacillota
GCC
Gly
>WENV170052907
CDZC01031910
304022
Bacillota
GCC
Gly
>WENV170052012
CDZC01006994
246023
Bacillota
TGC
Ala
>WENV170052323
CDZC01015682
238910
Bacillota
CTT
Lys
>WENV170052566
CDZC01021586
238910
Bacillota
CTT
Lys
>WENV170051843
CDZC01000854
338143
Bacillota
CTC
Glu
>WENV170051844
CDZC01000854
338143
Bacillota
CTC
Glu
>WENV170052509
CDZC01020201
338143
Bacillota
CTC
Glu
>WENV170052014
CDZC01006994
341763
Bacillota
CTC
Glu
>WENV170052768
CDZC01027877
341763
Bacillota
CTC
Glu
>WENV170052184
CDZC01011744
429429
Bacillota
CCA
Trp
>WENV170052719
CDZC01026456
11034
Bacillota
GGA
Ser
>WENV170052059
CDZC01007988
235117
Bacillota
TAC
Val
>WENV170052061
CDZC01007988
235079
Bacillota
GAA
Phe
>WENV170052187
CDZC01011770
235079
Bacillota
GAA
Phe
>WENV170052945
CDZC01032719
235087
Bacillota
TGC
Ala
>WENV170052307
CDZC01015365
173314
Bacillota
GAT
Ile
>WENV170052747
CDZC01027353
338149
Bacillota
CTC
Glu
>WENV170052780
CDZC01027910
338149
Bacillota
CTC
Glu
>WENV170052140
CDZC01010337
245298
Bacillota
CGG
Pro
>WENV170051859
CDZC01001322
413152
Bacillota
TCC
Gly
>WENV170052011
CDZC01006994
201704
Bacillota
GAT
Ile
>WENV170052139
CDZC01010337
411547
Bacillota
CTG
Gln
>WENV170052642
CDZC01023526
411547
Bacillota
CTG
Gln
>WENV170052236
CDZC01013236
4624
Bacillota
GCT
Ser
>WENV170052320
CDZC01015401
10680
Bacillota
GGA
Ser
>WENV170052670
CDZC01024382
313164
Bacillota
TTT
Lys
>WENV170052501
CDZC01019925
18852
Bacillota
GCT
Ser
>WENV170052792
CDZC01028195
235095
Bacillota
GGT
Thr
>WENV170052793
CDZC01028195
235095
Bacillota
GGT
Thr
>WENV170051865
CDZC01001398
411549
Bacillota
TTG
Gln
>WENV170052326
CDZC01015682
245386
Bacillota
CCA
Trp
>WENV170052795
CDZC01028197
59296
Bacillota
AAG
Leu
>WENV170052749
CDZC01027391
148188
Bacillota
CCG
Arg
>WENV170052854
CDZC01030801
148188
Bacillota
CCG
Arg
>WENV170052909
CDZC01031910
80612
Bacillota
GTA
Tyr
>WENV170052910
CDZC01031917
80612
Bacillota
GTA
Tyr
>WENV170051866
CDZC01001399
235124
Bacillota
TGG
Pro
>WENV170052278
CDZC01014386
338129
Bacillota
TGT
Thr
>WENV170052308
CDZC01015391
144583
Bacillota
ACG
Arg
>WENV170052428
CDZC01018450
144672
Bacillota
TCT
Arg
>WENV170052790
CDZC01028195
235171
Bacillota
CCA
Trp
>WENV170052365
CDZC01016545
144621
Bacillota
GTT
Asn
>WENV170052781
CDZC01027910
144621
Bacillota
GTT
Asn
>WENV170051864
CDZC01001324
58712
Bacillota
CAG
Leu
>WENV170052977
CDZC01033379
58712
Bacillota
CAG
Leu
>WENV170052453
CDZC01018495
245296
Bacillota
CCC
Gly
>WENV170052705
CDZC01025827
272992
Bacillota
CTT
Lys
>WENV170052748
CDZC01027353
272992
Bacillota
CTT
Lys
>WENV170052785
CDZC01028152
248965
Bacillota
GCC
Gly
>WENV170051813
CDZC01000304
144594
Bacillota
CAC
Val
>WENV170051966
CDZC01005304
338131
Bacillota
GCC
Gly
>WENV170052624
CDZC01022927
338131
Bacillota
GCC
Gly
>WENV170052806
CDZC01029156
338131
Bacillota
GCC
Gly
>WENV170052853
CDZC01030801
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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