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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053224
CDZD01015550
202812
Bacillota
CAT
Met
>WENV170053735
CDZD01041214
429443
Bacillota
GCA
Cys
>WENV170053099
CDZD01005940
169927
Bacillota
GTC
Asp
>WENV170053672
CDZD01038374
169927
Bacillota
GTC
Asp
>WENV170053088
CDZD01005894
156937
Bacillota
GTG
His
>WENV170053136
CDZD01008093
173314
Bacillota
GAT
Ile
>WENV170053736
CDZD01041214
37269
Bacillota
TGA
Ser
>WENV170053799
CDZD01043815
37269
Bacillota
TGA
Ser
>WENV170053585
CDZD01034457
287000
Bacillota
GTT
Asn
>WENV170053310
CDZD01020397
169968
Bacillota
CAT
Met
>WENV170053093
CDZD01005894
147684
Bacillota
ACG
Arg
>WENV170053415
CDZD01025496
18852
Bacillota
GCT
Ser
>WENV170053635
CDZD01036901
163943
Bacillota
GTC
Asp
>WENV170053792
CDZD01043528
163943
Bacillota
GTC
Asp
>WENV170053958
CDZD01052138
248965
Bacillota
GCC
Gly
>WENV170053135
CDZD01008093
299139
Bacillota
TGC
Ala
>WENV170053121
CDZD01007205
157105
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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