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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053825
CDZD01046453
144657
Bacteroidota
CGG
Pro
>WENV170053074
CDZD01005630
243025
Bacteroidota
CAT
Met
>WENV170053276
CDZD01019059
243025
Bacteroidota
CAT
Met
>WENV170053284
CDZD01019182
243025
Bacteroidota
CAT
Met
>WENV170053429
CDZD01026008
243025
Bacteroidota
CAT
Met
>WENV170052989
CDZD01000001
97336
Bacteroidota
CAG
Leu
>WENV170053805
CDZD01045354
97336
Bacteroidota
CAG
Leu
>WENV170053807
CDZD01045354
97336
Bacteroidota
CAG
Leu
>WENV170053069
CDZD01005196
58715
Bacteroidota
GAG
Leu
>WENV170053207
CDZD01014315
46165
Bacteroidota
TGA
Ser
>WENV170053688
CDZD01039336
17323
Bacteroidota
GGA
Ser
>WENV170053138
CDZD01008142
338486
Bacteroidota
CAT
Met
>WENV170053281
CDZD01019160
338486
Bacteroidota
CAT
Met
>WENV170053122
CDZD01007272
413663
Bacteroidota
CTG
Gln
>WENV170053520
CDZD01031699
136244
Bacteroidota
TAC
Val
>WENV170053521
CDZD01031699
136244
Bacteroidota
TAC
Val
>WENV170053818
CDZD01046066
136244
Bacteroidota
TAC
Val
>WENV170053819
CDZD01046066
136244
Bacteroidota
TAC
Val
>WENV170053820
CDZD01046066
136244
Bacteroidota
TAC
Val
>WENV170053068
CDZD01005196
59689
Bacteroidota
CAG
Leu
>WENV170053039
CDZD01004020
20893
Bacteroidota
GGA
Ser
>WENV170053183
CDZD01011855
144695
Bacteroidota
CAT
Met
>WENV170053608
CDZD01035667
344692
Bacteroidota
GGT
Thr
>WENV170053625
CDZD01036545
344692
Bacteroidota
GGT
Thr
>WENV170053591
CDZD01034810
145504
Bacteroidota
TGT
Thr
>WENV170053223
CDZD01015458
235203
Bacteroidota
TTT
Lys
>WENV170053624
CDZD01036540
238121
Bacteroidota
CTT
Lys
>WENV170053745
CDZD01042227
238121
Bacteroidota
CTT
Lys
>WENV170053746
CDZD01042227
238121
Bacteroidota
CTT
Lys
>WENV170053747
CDZD01042227
238121
Bacteroidota
CTT
Lys
>WENV170053388
CDZD01023773
126641
Bacteroidota
TAC
Val
>WENV170053389
CDZD01023773
126641
Bacteroidota
TAC
Val
>WENV170053512
CDZD01031241
126641
Bacteroidota
TAC
Val
>WENV170053748
CDZD01042227
45423
Bacteroidota
TGA
Ser
>WENV170053058
CDZD01005180
37076
Bacteroidota
TAA
Leu
>WENV170052995
CDZD01000469
58714
Bacteroidota
CAA
Leu
>WENV170053860
CDZD01048131
235165
Bacteroidota
CCA
Trp
>WENV170053370
CDZD01022691
301449
Bacteroidota
CGG
Pro
>WENV170053725
CDZD01041079
301449
Bacteroidota
CGG
Pro
>WENV170053489
CDZD01030115
141414
Bacteroidota
GGG
Pro
>WENV170053129
CDZD01007708
303954
Bacteroidota
GCC
Gly
>WENV170053619
CDZD01036171
303954
Bacteroidota
GCC
Gly
>WENV170053620
CDZD01036171
303954
Bacteroidota
GCC
Gly
>WENV170053763
CDZD01043038
235207
Bacteroidota
CAT
Met
>WENV170053022
CDZD01002694
144659
Bacteroidota
GTG
His
>WENV170053390
CDZD01023946
235180
Bacteroidota
CCA
Trp
>WENV170053261
CDZD01018283
344769
Bacteroidota
CTC
Glu
>WENV170053690
CDZD01039347
80614
Bacteroidota
>WENV170053226
CDZD01015583
154643
Bacteroidota
CAT
Met
>WENV170053532
CDZD01032147
154643
Bacteroidota
CAT
Met
>WENV170053158
CDZD01010211
415558
Bacteroidota
TTG
Gln
>WENV170053314
CDZD01020401
144590
Bacteroidota
GTT
Asn
>WENV170053315
CDZD01020401
144590
Bacteroidota
GTT
Asn
>WENV170053316
CDZD01020401
144590
Bacteroidota
GTT
Asn
>WENV170053666
CDZD01038373
144590
Bacteroidota
GTT
Asn
>WENV170053667
CDZD01038373
144590
Bacteroidota
GTT
Asn
>WENV170053668
CDZD01038373
144590
Bacteroidota
GTT
Asn
>WENV170053669
CDZD01038373
144590
Bacteroidota
GTT
Asn
>WENV170053670
CDZD01038373
144590
Bacteroidota
GTT
Asn
>WENV170052996
CDZD01000471
144639
Bacteroidota
GGC
Ala
>WENV170053168
CDZD01010867
338164
Bacteroidota
TTC
Glu
>WENV170053538
CDZD01032563
95875
Bacteroidota
TAG
Leu
>WENV170053609
CDZD01035679
95875
Bacteroidota
TAG
Leu
>WENV170053563
CDZD01033461
139743
Bacteroidota
GGG
Pro
>WENV170053451
CDZD01027631
240012
Bacteroidota
CCC
Gly
>WENV170053338
CDZD01022225
44852
Bacteroidota
TAA
Leu
>WENV170053171
CDZD01010941
238606
Bacteroidota
CGG
Pro
>WENV170053029
CDZD01003078
150485
Bacteroidota
GTT
Asn
>WENV170053663
CDZD01038359
411550
Bacteroidota
CTG
Gln
>WENV170053664
CDZD01038359
411550
Bacteroidota
CTG
Gln
>WENV170053665
CDZD01038359
411550
Bacteroidota
CTG
Gln
>WENV170053259
CDZD01018280
19528
Bacteroidota
GGA
Ser
>WENV170053021
CDZD01002672
425638
Bacteroidota
CTG
Gln
>WENV170053488
CDZD01030115
425638
Bacteroidota
CTG
Gln
>WENV170053005
CDZD01000966
353927
Bacteroidota
TTC
Glu
>WENV170053254
CDZD01018188
353927
Bacteroidota
TTC
Glu
>WENV170053255
CDZD01018188
353927
Bacteroidota
TTC
Glu
>WENV170053426
CDZD01025934
353927
Bacteroidota
TTC
Glu
>WENV170053654
CDZD01037886
353927
Bacteroidota
TTC
Glu
>WENV170053655
CDZD01037886
353927
Bacteroidota
TTC
Glu
>WENV170053765
CDZD01043042
353927
Bacteroidota
TTC
Glu
>WENV170053384
CDZD01023615
185921
Bacteroidota
GTC
Asp
>WENV170053743
CDZD01042049
146530
Bacteroidota
TGT
Thr
>WENV170053011
CDZD01001655
414426
Bacteroidota
CTG
Gln
>WENV170053205
CDZD01013863
414426
Bacteroidota
CTG
Gln
>WENV170053803
CDZD01045333
414426
Bacteroidota
CTG
Gln
>WENV170052988
CDZD01000001
59498
Bacteroidota
GAG
Leu
>WENV170052990
CDZD01000001
59498
Bacteroidota
GAG
Leu
>WENV170053806
CDZD01045354
59498
Bacteroidota
GAG
Leu
>WENV170053808
CDZD01045354
59498
Bacteroidota
GAG
Leu
>WENV170053527
CDZD01032115
151960
Bacteroidota
GGC
Ala
>WENV170053511
CDZD01031234
235129
Bacteroidota
GCC
Gly
>WENV170053172
CDZD01010941
313363
Bacteroidota
GAA
Phe
>WENV170053529
CDZD01032123
313363
Bacteroidota
GAA
Phe
>WENV170053864
CDZD01048226
313363
Bacteroidota
GAA
Phe
>WENV170053387
CDZD01023652
411629
Bacteroidota
TTG
Gln
>WENV170053428
CDZD01025993
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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