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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170055447
CDZF01006183
158247
Bacillota
>WENV170055647
CDZF01014488
148239
Bacillota
TCT
Arg
>WENV170055471
CDZF01006686
429443
Bacillota
GCA
Cys
>WENV170055698
CDZF01016506
245370
Bacillota
TGT
Thr
>WENV170055581
CDZF01012002
235150
Bacillota
TGC
Ala
>WENV170055404
CDZF01004733
169927
Bacillota
GTC
Asp
>WENV170055428
CDZF01005524
169927
Bacillota
GTC
Asp
>WENV170055348
CDZF01003209
156937
Bacillota
GTG
His
>WENV170055648
CDZF01014488
156937
Bacillota
GTG
His
>WENV170055547
CDZF01009809
274189
Bacillota
TGT
Thr
>WENV170055591
CDZF01012316
274189
Bacillota
TGT
Thr
>WENV170055963
CDZF01030067
274189
Bacillota
TGT
Thr
>WENV170056098
CDZF01036751
274189
Bacillota
TGT
Thr
>WENV170056031
CDZF01032607
173314
Bacillota
GAT
Ile
>WENV170056300
CDZF01044940
173314
Bacillota
GAT
Ile
>WENV170055322
CDZF01002426
37269
Bacillota
TGA
Ser
>WENV170056007
CDZF01031469
37269
Bacillota
TGA
Ser
>WENV170055945
CDZF01028640
287000
Bacillota
GTT
Asn
>WENV170055464
CDZF01006668
169968
Bacillota
CAT
Met
>WENV170055844
CDZF01023316
169968
Bacillota
CAT
Met
>WENV170055339
CDZF01003209
147684
Bacillota
ACG
Arg
>WENV170055501
CDZF01007513
18852
Bacillota
GCT
Ser
>WENV170055942
CDZF01028596
241471
Bacillota
TGC
Ala
>WENV170055396
CDZF01004666
245386
Bacillota
CCA
Trp
>WENV170055796
CDZF01020932
163943
Bacillota
GTC
Asp
>WENV170055869
CDZF01024873
163943
Bacillota
GTC
Asp
>WENV170056274
CDZF01043927
163943
Bacillota
GTC
Asp
>WENV170056280
CDZF01043964
163943
Bacillota
GTC
Asp
>WENV170055324
CDZF01002604
157838
Bacillota
GTC
Asp
>WENV170055897
CDZF01026131
292519
Bacillota
CAT
Met
>WENV170056301
CDZF01044954
247734
Bacillota
TGC
Ala
>WENV170056332
CDZF01046295
277200
Bacillota
GGC
Ala
>WENV170055701
CDZF01016506
243098
Bacillota
GGT
Thr
>WENV170055544
CDZF01009597
344240
Bacillota
GCC
Gly
>WENV170055543
CDZF01009597
196632
Bacillota
GTC
Asp
>WENV170055326
CDZF01002604
248965
Bacillota
GCC
Gly
>WENV170055759
CDZF01019428
248965
Bacillota
GCC
Gly
>WENV170056318
CDZF01045900
178024
Bacillota
TCT
Arg
>WENV170056299
CDZF01044940
299139
Bacillota
TGC
Ala
>WENV170055465
CDZF01006668
272488
Bacillota
GAA
Phe
>WENV170055585
CDZF01012058
272488
Bacillota
GAA
Phe
>WENV170055845
CDZF01023316
272488
Bacillota
GAA
Phe
>WENV170055791
CDZF01020890
272488
Bacillota
GAA
Phe
>WENV170056140
CDZF01038133
157105
Bacillota
GAT
Ile
>WENV170055329
CDZF01002691
338128
Bacillota
TTC
Glu
>WENV170055571
CDZF01011231
338128
Bacillota
TTC
Glu
>WENV170055706
CDZF01016852
338128
Bacillota
TTC
Glu
>WENV170055866
CDZF01024873
338128
Bacillota
TTC
Glu
>WENV170056310
CDZF01045072
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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