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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170055822
CDZF01022497
235097
Bacteroidota
TTT
Lys
>WENV170055888
CDZF01025446
235097
Bacteroidota
TTT
Lys
>WENV170055693
CDZF01016451
243025
Bacteroidota
CAT
Met
>WENV170055948
CDZF01028717
243025
Bacteroidota
CAT
Met
>WENV170055984
CDZF01030783
243025
Bacteroidota
CAT
Met
>WENV170056131
CDZF01037800
243025
Bacteroidota
CAT
Met
>WENV170056319
CDZF01045916
97336
Bacteroidota
CAG
Leu
>WENV170055969
CDZF01030176
338155
Bacteroidota
CTC
Glu
>WENV170056220
CDZF01041405
17323
Bacteroidota
GGA
Ser
>WENV170056292
CDZF01044641
413663
Bacteroidota
CTG
Gln
>WENV170056076
CDZF01034665
136244
Bacteroidota
TAC
Val
>WENV170056152
CDZF01038727
136244
Bacteroidota
TAC
Val
>WENV170056153
CDZF01038727
136244
Bacteroidota
TAC
Val
>WENV170056221
CDZF01041413
136244
Bacteroidota
TAC
Val
>WENV170055659
CDZF01014632
144695
Bacteroidota
CAT
Met
>WENV170055353
CDZF01003235
344692
Bacteroidota
GGT
Thr
>WENV170055959
CDZF01029791
344692
Bacteroidota
GGT
Thr
>WENV170055999
CDZF01031218
145504
Bacteroidota
TGT
Thr
>WENV170055599
CDZF01012394
341950
Bacteroidota
>WENV170056236
CDZF01042197
341950
Bacteroidota
>WENV170056212
CDZF01040753
126641
Bacteroidota
TAC
Val
>WENV170056213
CDZF01040753
126641
Bacteroidota
TAC
Val
>WENV170056214
CDZF01040753
126641
Bacteroidota
TAC
Val
>WENV170055391
CDZF01004416
338132
Bacteroidota
GCA
Cys
>WENV170055742
CDZF01018784
37076
Bacteroidota
TAA
Leu
>WENV170055666
CDZF01014979
235165
Bacteroidota
CCA
Trp
>WENV170056006
CDZF01031466
280660
Bacteroidota
CCA
Trp
>WENV170056102
CDZF01036876
144656
Bacteroidota
GTG
His
>WENV170056256
CDZF01043168
235207
Bacteroidota
CAT
Met
>WENV170055958
CDZF01029782
144596
Bacteroidota
GGC
Ala
>WENV170055696
CDZF01016504
344769
Bacteroidota
CTC
Glu
>WENV170055639
CDZF01014295
16999
Bacteroidota
GGA
Ser
>WENV170055435
CDZF01005547
52358
Bacteroidota
TGA
Ser
>WENV170055708
CDZF01016854
52358
Bacteroidota
TGA
Ser
>WENV170055677
CDZF01015683
154643
Bacteroidota
CAT
Met
>WENV170056077
CDZF01034703
154643
Bacteroidota
CAT
Met
>WENV170056155
CDZF01038737
154643
Bacteroidota
CAT
Met
>WENV170056079
CDZF01035335
415558
Bacteroidota
TTG
Gln
>WENV170055992
CDZF01031027
144590
Bacteroidota
GTT
Asn
>WENV170055993
CDZF01031027
144590
Bacteroidota
GTT
Asn
>WENV170055288
CDZF01000239
144639
Bacteroidota
GGC
Ala
>WENV170056194
CDZF01039967
44852
Bacteroidota
TAA
Leu
>WENV170056039
CDZF01033045
238606
Bacteroidota
CGG
Pro
>WENV170055385
CDZF01004327
338165
Bacteroidota
GGT
Thr
>WENV170056025
CDZF01032244
19528
Bacteroidota
GGA
Ser
>WENV170055524
CDZF01008492
132360
Bacteroidota
GGG
Pro
>WENV170055922
CDZF01028199
132360
Bacteroidota
GGG
Pro
>WENV170056096
CDZF01036741
132360
Bacteroidota
GGG
Pro
>WENV170055388
CDZF01004341
425638
Bacteroidota
CTG
Gln
>WENV170055442
CDZF01005853
425638
Bacteroidota
CTG
Gln
>WENV170055546
CDZF01009611
425638
Bacteroidota
CTG
Gln
>WENV170056392
CDZF01048508
425638
Bacteroidota
CTG
Gln
>WENV170055995
CDZF01031034
239647
Bacteroidota
TTT
Lys
>WENV170055400
CDZF01004727
353927
Bacteroidota
TTC
Glu
>WENV170055541
CDZF01009469
353927
Bacteroidota
TTC
Glu
>WENV170055558
CDZF01010350
353927
Bacteroidota
TTC
Glu
>WENV170056050
CDZF01033174
353927
Bacteroidota
TTC
Glu
>WENV170056124
CDZF01037406
353927
Bacteroidota
TTC
Glu
>WENV170056312
CDZF01045466
353927
Bacteroidota
TTC
Glu
>WENV170056262
CDZF01043487
146530
Bacteroidota
TGT
Thr
>WENV170056297
CDZF01044749
146530
Bacteroidota
TGT
Thr
>WENV170055968
CDZF01030176
23696
Bacteroidota
GCT
Ser
>WENV170055476
CDZF01006909
414426
Bacteroidota
CTG
Gln
>WENV170056138
CDZF01038131
414426
Bacteroidota
CTG
Gln
>WENV170056320
CDZF01045916
59498
Bacteroidota
GAG
Leu
>WENV170056024
CDZF01032237
151960
Bacteroidota
GGC
Ala
>WENV170056189
CDZF01039952
151960
Bacteroidota
GGC
Ala
>WENV170055977
CDZF01030604
338125
Bacteroidota
CCT
Arg
>WENV170056258
CDZF01043229
338125
Bacteroidota
CCT
Arg
>WENV170055669
CDZF01015334
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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