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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059277
CDZH01041192
235097
Bacteroidota
TTT
Lys
>WENV170059285
CDZH01041746
95987
Bacteroidota
CAA
Leu
>WENV170060056
CDZH01072517
339412
Bacteroidota
GGT
Thr
>WENV170059620
CDZH01055418
235102
Bacteroidota
CGT
Thr
>WENV170058599
CDZH01016572
146761
Bacteroidota
GAT
Ile
>WENV170058973
CDZH01029376
144657
Bacteroidota
CGG
Pro
>WENV170059492
CDZH01049605
243025
Bacteroidota
CAT
Met
>WENV170059685
CDZH01057343
243025
Bacteroidota
CAT
Met
>WENV170060249
CDZH01080528
243025
Bacteroidota
CAT
Met
>WENV170060324
CDZH01083165
243025
Bacteroidota
CAT
Met
>WENV170058803
CDZH01024000
97336
Bacteroidota
CAG
Leu
>WENV170058405
CDZH01006714
338155
Bacteroidota
CTC
Glu
>WENV170058651
CDZH01018688
46165
Bacteroidota
TGA
Ser
>WENV170058613
CDZH01016701
17323
Bacteroidota
GGA
Ser
>WENV170060326
CDZH01083259
394247
Bacteroidota
CTC
Glu
>WENV170060327
CDZH01083259
394247
Bacteroidota
CTC
Glu
>WENV170059806
CDZH01062102
413663
Bacteroidota
CTG
Gln
>WENV170059807
CDZH01062102
413663
Bacteroidota
CTG
Gln
>WENV170059808
CDZH01062102
413663
Bacteroidota
CTG
Gln
>WENV170058452
CDZH01009432
136244
Bacteroidota
TAC
Val
>WENV170058453
CDZH01009432
136244
Bacteroidota
TAC
Val
>WENV170059329
CDZH01043034
136244
Bacteroidota
TAC
Val
>WENV170060057
CDZH01072517
237797
Bacteroidota
CCA
Trp
>WENV170058496
CDZH01011279
59689
Bacteroidota
CAG
Leu
>WENV170058466
CDZH01010060
436206
Bacteroidota
TTG
Gln
>WENV170059292
CDZH01042256
436206
Bacteroidota
TTG
Gln
>WENV170059530
CDZH01050831
436206
Bacteroidota
TTG
Gln
>WENV170059869
CDZH01064789
436206
Bacteroidota
TTG
Gln
>WENV170058823
CDZH01024676
412479
Bacteroidota
TTG
Gln
>WENV170058711
CDZH01020749
147147
Bacteroidota
GTG
His
>WENV170058712
CDZH01020749
147147
Bacteroidota
GTG
His
>WENV170059547
CDZH01051333
147147
Bacteroidota
GTG
His
>WENV170059548
CDZH01051333
147147
Bacteroidota
GTG
His
>WENV170058614
CDZH01016701
344692
Bacteroidota
GGT
Thr
>WENV170058652
CDZH01018688
344692
Bacteroidota
GGT
Thr
>WENV170058904
CDZH01026824
344692
Bacteroidota
GGT
Thr
>WENV170059861
CDZH01064637
344692
Bacteroidota
GGT
Thr
>WENV170059284
CDZH01041746
353373
Bacteroidota
>WENV170058517
CDZH01012092
338124
Bacteroidota
CCG
Arg
>WENV170060143
CDZH01076452
338124
Bacteroidota
CCG
Arg
>WENV170059483
CDZH01049438
338132
Bacteroidota
GCA
Cys
>WENV170059550
CDZH01051396
338132
Bacteroidota
GCA
Cys
>WENV170059893
CDZH01065372
338132
Bacteroidota
GCA
Cys
>WENV170059145
CDZH01036006
193809
Bacteroidota
CAT
Met
>WENV170059146
CDZH01036006
193809
Bacteroidota
CAT
Met
>WENV170058821
CDZH01024676
37076
Bacteroidota
TAA
Leu
>WENV170058451
CDZH01009428
280660
Bacteroidota
CCA
Trp
>WENV170058644
CDZH01018572
301449
Bacteroidota
CGG
Pro
>WENV170059013
CDZH01030730
301449
Bacteroidota
CGG
Pro
>WENV170060240
CDZH01079891
301449
Bacteroidota
CGG
Pro
>WENV170059256
CDZH01040544
144933
Bacteroidota
TCT
Arg
>WENV170059737
CDZH01059261
141414
Bacteroidota
GGG
Pro
>WENV170058472
CDZH01010084
144656
Bacteroidota
GTG
His
>WENV170060052
CDZH01072434
235207
Bacteroidota
CAT
Met
>WENV170059596
CDZH01054650
144596
Bacteroidota
GGC
Ala
>WENV170058525
CDZH01012616
80607
Bacteroidota
GTA
Tyr
>WENV170058418
CDZH01007909
113604
Bacteroidota
>WENV170059792
CDZH01061919
113604
Bacteroidota
>WENV170059795
CDZH01061919
113604
Bacteroidota
>WENV170059798
CDZH01061919
113604
Bacteroidota
>WENV170058232
CDZH01000798
344769
Bacteroidota
CTC
Glu
>WENV170058515
CDZH01012007
154643
Bacteroidota
CAT
Met
>WENV170059730
CDZH01059250
154643
Bacteroidota
CAT
Met
>WENV170060227
CDZH01079876
144590
Bacteroidota
GTT
Asn
>WENV170060228
CDZH01079876
144590
Bacteroidota
GTT
Asn
>WENV170060229
CDZH01079876
144590
Bacteroidota
GTT
Asn
>WENV170059014
CDZH01030731
95559
Bacteroidota
TAG
Leu
>WENV170060153
CDZH01077082
144655
Bacteroidota
GGC
Ala
>WENV170058695
CDZH01019940
95875
Bacteroidota
TAG
Leu
>WENV170059545
CDZH01051327
139743
Bacteroidota
GGG
Pro
>WENV170060095
CDZH01073896
44852
Bacteroidota
TAA
Leu
>WENV170060138
CDZH01076035
147439
Bacteroidota
TCT
Arg
>WENV170058812
CDZH01024227
196394
Bacteroidota
GTC
Asp
>WENV170059198
CDZH01037905
196394
Bacteroidota
GTC
Asp
>WENV170059199
CDZH01037905
196394
Bacteroidota
GTC
Asp
>WENV170058468
CDZH01010063
425638
Bacteroidota
CTG
Gln
>WENV170059937
CDZH01067220
425638
Bacteroidota
CTG
Gln
>WENV170060335
CDZH01083352
19317
Bacteroidota
GGA
Ser
>WENV170058802
CDZH01023993
353927
Bacteroidota
TTC
Glu
>WENV170059965
CDZH01068640
353927
Bacteroidota
TTC
Glu
>WENV170058209
CDZH01000650
414426
Bacteroidota
CTG
Gln
>WENV170058533
CDZH01013307
55270
Bacteroidota
TGA
Ser
>WENV170059290
CDZH01042073
55270
Bacteroidota
TGA
Ser
>WENV170059935
CDZH01067217
55270
Bacteroidota
TGA
Ser
>WENV170058583
CDZH01015723
151960
Bacteroidota
GGC
Ala
>WENV170060172
CDZH01077291
151960
Bacteroidota
GGC
Ala
>WENV170058756
CDZH01022697
16220
Bacteroidota
GGA
Ser
>WENV170059352
CDZH01044321
16220
Bacteroidota
GGA
Ser
>WENV170058908
CDZH01027291
338125
Bacteroidota
CCT
Arg
>WENV170059084
CDZH01033239
338125
Bacteroidota
CCT
Arg
>WENV170059186
CDZH01037447
338125
Bacteroidota
CCT
Arg
>WENV170058428
CDZH01008654
313363
Bacteroidota
GAA
Phe
>WENV170058564
CDZH01014691
313363
Bacteroidota
GAA
Phe
>WENV170058565
CDZH01014820
313363
Bacteroidota
GAA
Phe
>WENV170059032
CDZH01031323
313363
Bacteroidota
GAA
Phe
>WENV170059179
CDZH01036634
313363
Bacteroidota
GAA
Phe
>WENV170059288
CDZH01041746
313363
Bacteroidota
GAA
Phe
>WENV170059377
CDZH01045062
313363
Bacteroidota
GAA
Phe
>WENV170059404
CDZH01046479
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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