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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170059153
CDZH01036581
119661
Verrucomicrobiota
CAA
Leu
>WENV170059161
CDZH01036581
155256
Verrucomicrobiota
TCT
Arg
>WENV170059160
CDZH01036581
246701
Verrucomicrobiota
TTT
Lys
>WENV170059703
CDZH01057976
345141
Verrucomicrobiota
TTG
Gln
>WENV170058368
CDZH01005359
345133
Verrucomicrobiota
GAC
Val
>WENV170060124
CDZH01075237
82054
Verrucomicrobiota
GTA
Tyr
>WENV170058539
CDZH01013316
246677
Verrucomicrobiota
CTT
Lys
>WENV170058540
CDZH01013316
246677
Verrucomicrobiota
CTT
Lys
>WENV170059658
CDZH01056017
246677
Verrucomicrobiota
CTT
Lys
>WENV170059659
CDZH01056017
246677
Verrucomicrobiota
CTT
Lys
>WENV170059660
CDZH01056017
246677
Verrucomicrobiota
CTT
Lys
>WENV170058538
CDZH01013316
246677
Verrucomicrobiota
CTT
Lys
>WENV170059649
CDZH01056015
344844
Verrucomicrobiota
GCA
Cys
>WENV170059155
CDZH01036581
155264
Verrucomicrobiota
GGG
Pro
>WENV170058367
CDZH01005359
344845
Verrucomicrobiota
CTG
Gln
>WENV170058370
CDZH01005359
128202
Verrucomicrobiota
GTC
Asp
>WENV170059158
CDZH01036581
128202
Verrucomicrobiota
GTC
Asp
>WENV170059156
CDZH01036581
414625
Verrucomicrobiota
CCC
Gly
>WENV170060309
CDZH01082676
46246
Verrucomicrobiota
TGA
Ser
>WENV170059154
CDZH01036581
97755
Verrucomicrobiota
TAG
Leu
>WENV170059650
CDZH01056015
246700
Verrucomicrobiota
TTC
Glu
>WENV170060311
CDZH01082676
246700
Verrucomicrobiota
TTC
Glu
>WENV170059652
CDZH01056015
246687
Verrucomicrobiota
CGC
Ala
>WENV170059162
CDZH01036581
419909
Verrucomicrobiota
TCC
Gly
>WENV170059611
CDZH01055360
344841
Verrucomicrobiota
CAC
Val
>WENV170059166
CDZH01036581
82056
Verrucomicrobiota
TAA
Leu
>WENV170059657
CDZH01056017
344842
Verrucomicrobiota
CGT
Thr
>WENV170060125
CDZH01075237
170105
Verrucomicrobiota
CAT
Met
>WENV170059210
CDZH01037999
287733
Verrucomicrobiota
CCA
Trp
>WENV170059651
CDZH01056015
345123
Verrucomicrobiota
TGT
Thr
>WENV170059165
CDZH01036581
345110
Verrucomicrobiota
CCT
Arg
>WENV170060312
CDZH01082676
344839
Verrucomicrobiota
GTG
His
>WENV170059173
CDZH01036590
7274
Verrucomicrobiota
CGA
Ser
>WENV170059167
CDZH01036581
246260
Verrucomicrobiota
>WENV170059656
CDZH01056017
155268
Verrucomicrobiota
CGG
Pro
>WENV170059648
CDZH01056015
82181
Verrucomicrobiota
AAG
Leu
>WENV170059163
CDZH01036581
246728
Verrucomicrobiota
GAA
Phe
>WENV170059168
CDZH01036581
7256
Verrucomicrobiota
GCT
Ser
>WENV170060314
CDZH01082676
345115
Verrucomicrobiota
CAT
Met
>WENV170058369
CDZH01005359
345119
Verrucomicrobiota
TAC
Val
>WENV170060123
CDZH01075237
345124
Verrucomicrobiota
GTT
Asn
>WENV170059159
CDZH01036581
17023
Verrucomicrobiota
GGA
Ser
>WENV170059612
CDZH01055360
368497
Verrucomicrobiota
GCC
Gly
>WENV170060310
CDZH01082676
368497
Verrucomicrobiota
GCC
Gly
>WENV170059157
CDZH01036581
345142
Verrucomicrobiota
CCG
Arg
>WENV170060313
CDZH01082676
246709
Verrucomicrobiota
CAT
Met
>WENV170059164
CDZH01036581
154693
Verrucomicrobiota
TGG
Pro
>WENV170059209
CDZH01037999
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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