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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170063809
CDZK01025583
158247
Bacillota
>WENV170063874
CDZK01027288
44854
Bacillota
TGA
Ser
>WENV170064208
CDZK01037297
238910
Bacillota
CTT
Lys
>WENV170064469
CDZK01046013
238910
Bacillota
CTT
Lys
>WENV170063663
CDZK01021386
338147
Bacillota
CTC
Glu
>WENV170063723
CDZK01022716
338147
Bacillota
CTC
Glu
>WENV170064155
CDZK01035439
338147
Bacillota
CTC
Glu
>WENV170064263
CDZK01038856
338147
Bacillota
CTC
Glu
>WENV170063713
CDZK01022108
235114
Bacillota
TTT
Lys
>WENV170063308
CDZK01011279
44859
Bacillota
AAG
Leu
>WENV170064401
CDZK01044668
274189
Bacillota
TGT
Thr
>WENV170064546
CDZK01047946
274189
Bacillota
TGT
Thr
>WENV170063435
CDZK01015875
235079
Bacillota
GAA
Phe
>WENV170064430
CDZK01045434
173314
Bacillota
GAT
Ile
>WENV170062953
CDZK01000214
338149
Bacillota
CTC
Glu
>WENV170062968
CDZK01000893
271471
Bacillota
GCC
Gly
>WENV170063961
CDZK01029856
271471
Bacillota
GCC
Gly
>WENV170063143
CDZK01006908
245298
Bacillota
CGG
Pro
>WENV170064062
CDZK01033096
245298
Bacillota
CGG
Pro
>WENV170063433
CDZK01015875
235078
Bacillota
TAC
Val
>WENV170063087
CDZK01004866
240017
Bacillota
GCC
Gly
>WENV170063309
CDZK01011424
240017
Bacillota
GCC
Gly
>WENV170063142
CDZK01006908
411547
Bacillota
CTG
Gln
>WENV170063462
CDZK01016027
411547
Bacillota
CTG
Gln
>WENV170063875
CDZK01027337
411547
Bacillota
CTG
Gln
>WENV170063921
CDZK01028798
411547
Bacillota
CTG
Gln
>WENV170064061
CDZK01033096
411547
Bacillota
CTG
Gln
>WENV170063310
CDZK01011424
263765
Bacillota
TAC
Val
>WENV170063339
CDZK01012347
263765
Bacillota
TAC
Val
>WENV170063826
CDZK01025956
263765
Bacillota
TAC
Val
>WENV170064083
CDZK01033807
263765
Bacillota
TAC
Val
>WENV170063150
CDZK01007001
344183
Bacillota
CTG
Gln
>WENV170062972
CDZK01001192
411549
Bacillota
TTG
Gln
>WENV170064352
CDZK01042562
411549
Bacillota
TTG
Gln
>WENV170064588
CDZK01049309
411549
Bacillota
TTG
Gln
>WENV170063215
CDZK01008578
245386
Bacillota
CCA
Trp
>WENV170063465
CDZK01016242
148188
Bacillota
CCG
Arg
>WENV170063060
CDZK01003874
338129
Bacillota
TGT
Thr
>WENV170063109
CDZK01005427
338129
Bacillota
TGT
Thr
>WENV170063941
CDZK01029528
157838
Bacillota
GTC
Asp
>WENV170063061
CDZK01003951
144583
Bacillota
ACG
Arg
>WENV170063103
CDZK01005201
144583
Bacillota
ACG
Arg
>WENV170064073
CDZK01033566
144583
Bacillota
ACG
Arg
>WENV170064127
CDZK01034980
247734
Bacillota
TGC
Ala
>WENV170063242
CDZK01009350
144621
Bacillota
GTT
Asn
>WENV170063712
CDZK01022108
235113
Bacillota
GAA
Phe
>WENV170064216
CDZK01037683
235113
Bacillota
GAA
Phe
>WENV170063079
CDZK01004786
58712
Bacillota
CAG
Leu
>WENV170063887
CDZK01027690
58712
Bacillota
CAG
Leu
>WENV170063137
CDZK01006346
245296
Bacillota
CCC
Gly
>WENV170063302
CDZK01011046
245296
Bacillota
CCC
Gly
>WENV170063943
CDZK01029528
248965
Bacillota
GCC
Gly
>WENV170064145
CDZK01035410
248965
Bacillota
GCC
Gly
>WENV170064535
CDZK01047542
248965
Bacillota
GCC
Gly
>WENV170063080
CDZK01004828
144594
Bacillota
CAC
Val
>WENV170063332
CDZK01012046
144594
Bacillota
CAC
Val
>WENV170064580
CDZK01048925
144594
Bacillota
CAC
Val
>WENV170064326
CDZK01041145
95563
Bacillota
GTA
Tyr
>WENV170064506
CDZK01046749
338127
Bacillota
TTG
Gln
>WENV170063512
CDZK01017499
238945
Bacillota
GCC
Gly
>WENV170064203
CDZK01037031
238945
Bacillota
GCC
Gly
>WENV170064204
CDZK01037031
238945
Bacillota
GCC
Gly
>WENV170064205
CDZK01037031
238945
Bacillota
GCC
Gly
>WENV170064206
CDZK01037031
238945
Bacillota
GCC
Gly
>WENV170064356
CDZK01043008
238945
Bacillota
GCC
Gly
>WENV170063930
CDZK01029171
273862
Bacillota
TGC
Ala
>WENV170064429
CDZK01045434
273862
Bacillota
TGC
Ala
>WENV170063045
CDZK01003249
338128
Bacillota
TTC
Glu
>WENV170063659
CDZK01021250
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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