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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170063858
CDZK01026810
119661
Verrucomicrobiota
CAA
Leu
>WENV170063265
CDZK01009833
155256
Verrucomicrobiota
TCT
Arg
>WENV170063545
CDZK01017966
155256
Verrucomicrobiota
TCT
Arg
>WENV170063119
CDZK01005626
246701
Verrucomicrobiota
TTT
Lys
>WENV170064478
CDZK01046329
345141
Verrucomicrobiota
TTG
Gln
>WENV170062998
CDZK01002005
345133
Verrucomicrobiota
GAC
Val
>WENV170063037
CDZK01002832
345133
Verrucomicrobiota
GAC
Val
>WENV170063870
CDZK01026979
82054
Verrucomicrobiota
GTA
Tyr
>WENV170063564
CDZK01018503
246677
Verrucomicrobiota
CTT
Lys
>WENV170063565
CDZK01018503
246677
Verrucomicrobiota
CTT
Lys
>WENV170063566
CDZK01018503
246677
Verrucomicrobiota
CTT
Lys
>WENV170063586
CDZK01019082
344844
Verrucomicrobiota
GCA
Cys
>WENV170063102
CDZK01004965
155264
Verrucomicrobiota
GGG
Pro
>WENV170063036
CDZK01002832
344845
Verrucomicrobiota
CTG
Gln
>WENV170063030
CDZK01002830
128202
Verrucomicrobiota
GTC
Asp
>WENV170063035
CDZK01002832
128202
Verrucomicrobiota
GTC
Asp
>WENV170063975
CDZK01030286
414625
Verrucomicrobiota
CCC
Gly
>WENV170064600
CDZK01049530
46246
Verrucomicrobiota
TGA
Ser
>WENV170064374
CDZK01043558
97755
Verrucomicrobiota
TAG
Leu
>WENV170063587
CDZK01019082
246700
Verrucomicrobiota
TTC
Glu
>WENV170063608
CDZK01019414
246700
Verrucomicrobiota
TTC
Glu
>WENV170063589
CDZK01019082
246687
Verrucomicrobiota
CGC
Ala
>WENV170063974
CDZK01030286
419909
Verrucomicrobiota
TCC
Gly
>WENV170064477
CDZK01046329
344841
Verrucomicrobiota
CAC
Val
>WENV170063557
CDZK01018351
60880
Verrucomicrobiota
CAG
Leu
>WENV170063859
CDZK01026810
82056
Verrucomicrobiota
TAA
Leu
>WENV170063563
CDZK01018503
344842
Verrucomicrobiota
CGT
Thr
>WENV170063094
CDZK01004875
170105
Verrucomicrobiota
CAT
Met
>WENV170063588
CDZK01019082
345123
Verrucomicrobiota
TGT
Thr
>WENV170064375
CDZK01043558
345110
Verrucomicrobiota
CCT
Arg
>WENV170063609
CDZK01019414
344839
Verrucomicrobiota
GTG
His
>WENV170064211
CDZK01037299
7274
Verrucomicrobiota
CGA
Ser
>WENV170063860
CDZK01026810
246260
Verrucomicrobiota
>WENV170063562
CDZK01018503
155268
Verrucomicrobiota
CGG
Pro
>WENV170063585
CDZK01019082
82181
Verrucomicrobiota
AAG
Leu
>WENV170063100
CDZK01004965
246728
Verrucomicrobiota
GAA
Phe
>WENV170063656
CDZK01021035
7256
Verrucomicrobiota
GCT
Ser
>WENV170063606
CDZK01019414
345115
Verrucomicrobiota
CAT
Met
>WENV170063854
CDZK01026602
345119
Verrucomicrobiota
TAC
Val
>WENV170063869
CDZK01026979
345124
Verrucomicrobiota
GTT
Asn
>WENV170063031
CDZK01002830
17023
Verrucomicrobiota
GGA
Ser
>WENV170063607
CDZK01019414
368497
Verrucomicrobiota
GCC
Gly
>WENV170063733
CDZK01023257
368497
Verrucomicrobiota
GCC
Gly
>WENV170064055
CDZK01032691
345142
Verrucomicrobiota
CCG
Arg
>WENV170063610
CDZK01019414
246709
Verrucomicrobiota
CAT
Met
>WENV170063101
CDZK01004965
154693
Verrucomicrobiota
TGG
Pro
>WENV170063555
CDZK01018351
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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