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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170065506
CDZM01004713
235097
Bacteroidota
TTT
Lys
>WENV170065535
CDZM01006142
235097
Bacteroidota
TTT
Lys
>WENV170065802
CDZM01018766
235097
Bacteroidota
TTT
Lys
>WENV170065862
CDZM01021632
235097
Bacteroidota
TTT
Lys
>WENV170065684
CDZM01013539
235102
Bacteroidota
CGT
Thr
>WENV170065770
CDZM01016796
144657
Bacteroidota
CGG
Pro
>WENV170065897
CDZM01022407
339341
Bacteroidota
GGT
Thr
>WENV170065765
CDZM01016400
58715
Bacteroidota
GAG
Leu
>WENV170065438
CDZM01001528
338486
Bacteroidota
CAT
Met
>WENV170065975
CDZM01025369
338486
Bacteroidota
CAT
Met
>WENV170065608
CDZM01009876
415410
Bacteroidota
TTG
Gln
>WENV170065747
CDZM01016150
415410
Bacteroidota
TTG
Gln
>WENV170065831
CDZM01020409
415410
Bacteroidota
TTG
Gln
>WENV170065806
CDZM01018953
411543
Bacteroidota
CTG
Gln
>WENV170065578
CDZM01007942
188343
Bacteroidota
TGC
Ala
>WENV170065780
CDZM01017305
188343
Bacteroidota
TGC
Ala
>WENV170065547
CDZM01006368
237247
Bacteroidota
TTT
Lys
>WENV170065655
CDZM01012369
238121
Bacteroidota
CTT
Lys
>WENV170065656
CDZM01012369
238121
Bacteroidota
CTT
Lys
>WENV170065657
CDZM01012369
238121
Bacteroidota
CTT
Lys
>WENV170065489
CDZM01004052
338132
Bacteroidota
GCA
Cys
>WENV170065588
CDZM01008509
338132
Bacteroidota
GCA
Cys
>WENV170065721
CDZM01015039
338132
Bacteroidota
GCA
Cys
>WENV170065738
CDZM01015553
338132
Bacteroidota
GCA
Cys
>WENV170065743
CDZM01015952
338132
Bacteroidota
GCA
Cys
>WENV170065789
CDZM01017748
338132
Bacteroidota
GCA
Cys
>WENV170065907
CDZM01022562
338132
Bacteroidota
GCA
Cys
>WENV170065974
CDZM01025369
144933
Bacteroidota
TCT
Arg
>WENV170065509
CDZM01004727
235207
Bacteroidota
CAT
Met
>WENV170065698
CDZM01014474
235207
Bacteroidota
CAT
Met
>WENV170065512
CDZM01005099
80607
Bacteroidota
GTA
Tyr
>WENV170065930
CDZM01023859
80607
Bacteroidota
GTA
Tyr
>WENV170065599
CDZM01009111
113604
Bacteroidota
>WENV170065601
CDZM01009111
113604
Bacteroidota
>WENV170065732
CDZM01015210
80614
Bacteroidota
>WENV170065826
CDZM01020090
80614
Bacteroidota
>WENV170065896
CDZM01022407
80614
Bacteroidota
>WENV170065685
CDZM01013541
144590
Bacteroidota
GTT
Asn
>WENV170065498
CDZM01004289
95559
Bacteroidota
TAG
Leu
>WENV170065749
CDZM01016156
419272
Bacteroidota
CTG
Gln
>WENV170065870
CDZM01021816
144655
Bacteroidota
GGC
Ala
>WENV170065847
CDZM01021058
95875
Bacteroidota
TAG
Leu
>WENV170065976
CDZM01025369
240012
Bacteroidota
CCC
Gly
>WENV170065687
CDZM01013541
44852
Bacteroidota
TAA
Leu
>WENV170065786
CDZM01017568
50727
Bacteroidota
TGA
Ser
>WENV170065505
CDZM01004713
132360
Bacteroidota
GGG
Pro
>WENV170065843
CDZM01020925
132360
Bacteroidota
GGG
Pro
>WENV170065437
CDZM01001525
425638
Bacteroidota
CTG
Gln
>WENV170065528
CDZM01005624
425638
Bacteroidota
CTG
Gln
>WENV170065730
CDZM01015210
185921
Bacteroidota
GTC
Asp
>WENV170065948
CDZM01024272
185921
Bacteroidota
GTC
Asp
>WENV170065565
CDZM01007189
16224
Bacteroidota
GGA
Ser
>WENV170065750
CDZM01016156
16220
Bacteroidota
GGA
Ser
>WENV170065866
CDZM01021639
338125
Bacteroidota
CCT
Arg
>WENV170065954
CDZM01024278
338125
Bacteroidota
CCT
Arg
>WENV170065763
CDZM01016400
235129
Bacteroidota
GCC
Gly
>WENV170065882
CDZM01022405
235129
Bacteroidota
GCC
Gly
>WENV170065884
CDZM01022405
235129
Bacteroidota
GCC
Gly
>WENV170065890
CDZM01022407
235129
Bacteroidota
GCC
Gly
>WENV170065892
CDZM01022407
235129
Bacteroidota
GCC
Gly
>WENV170065894
CDZM01022407
235129
Bacteroidota
GCC
Gly
>WENV170065636
CDZM01011328
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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