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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170066255
CDZN01005727
267649
Bacillota
TAC
Val
>WENV170066233
CDZN01005523
44854
Bacillota
TGA
Ser
>WENV170067007
CDZN01023296
241441
Bacillota
GCC
Gly
>WENV170066561
CDZN01011957
246023
Bacillota
TGC
Ala
>WENV170066884
CDZN01020433
235137
Bacillota
TGC
Ala
>WENV170066979
CDZN01022830
235137
Bacillota
TGC
Ala
>WENV170066567
CDZN01012026
338143
Bacillota
CTC
Glu
>WENV170066225
CDZN01005267
341763
Bacillota
CTC
Glu
>WENV170066463
CDZN01010281
341763
Bacillota
CTC
Glu
>WENV170067032
CDZN01024002
11034
Bacillota
GGA
Ser
>WENV170066079
CDZN01002162
274189
Bacillota
TGT
Thr
>WENV170066498
CDZN01011064
245298
Bacillota
CGG
Pro
>WENV170066939
CDZN01021571
413152
Bacillota
TCC
Gly
>WENV170067010
CDZN01023500
413152
Bacillota
TCC
Gly
>WENV170067047
CDZN01024364
411547
Bacillota
CTG
Gln
>WENV170066978
CDZN01022830
18852
Bacillota
GCT
Ser
>WENV170066014
CDZN01000787
411549
Bacillota
TTG
Gln
>WENV170066189
CDZN01004653
59296
Bacillota
AAG
Leu
>WENV170066982
CDZN01022864
148188
Bacillota
CCG
Arg
>WENV170066392
CDZN01008155
80612
Bacillota
GTA
Tyr
>WENV170066909
CDZN01020726
235124
Bacillota
TGG
Pro
>WENV170066828
CDZN01018904
144583
Bacillota
ACG
Arg
>WENV170066198
CDZN01004891
144672
Bacillota
TCT
Arg
>WENV170066417
CDZN01008952
58712
Bacillota
CAG
Leu
>WENV170066875
CDZN01019835
58712
Bacillota
CAG
Leu
>WENV170066511
CDZN01011100
144594
Bacillota
CAC
Val
>WENV170066381
CDZN01008012
338131
Bacillota
GCC
Gly
>WENV170066980
CDZN01022830
338131
Bacillota
GCC
Gly
>WENV170066149
CDZN01003497
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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