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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170071082
CDZQ01045268
235153
Actinomycetota
CCT
Arg
>WENV170070360
CDZQ01022565
245301
Actinomycetota
GCC
Gly
>WENV170070852
CDZQ01037786
245301
Actinomycetota
GCC
Gly
>WENV170070854
CDZQ01037786
245301
Actinomycetota
GCC
Gly
>WENV170070856
CDZQ01037786
245301
Actinomycetota
GCC
Gly
>WENV170070930
CDZQ01040679
153948
Actinomycetota
GGG
Pro
>WENV170069798
CDZQ01003764
144636
Actinomycetota
GAT
Ile
>WENV170069800
CDZQ01003764
144636
Actinomycetota
GAT
Ile
>WENV170069951
CDZQ01007951
144636
Actinomycetota
GAT
Ile
>WENV170069953
CDZQ01007951
144636
Actinomycetota
GAT
Ile
>WENV170071378
CDZQ01054788
338139
Actinomycetota
GTT
Asn
>WENV170071379
CDZQ01054788
338139
Actinomycetota
GTT
Asn
>WENV170069956
CDZQ01007954
414234
Actinomycetota
CTG
Gln
>WENV170071541
CDZQ01060202
61501
Actinomycetota
CAG
Leu
>WENV170069703
CDZQ01000995
158513
Actinomycetota
TGG
Pro
>WENV170070853
CDZQ01037786
412834
Actinomycetota
GCA
Cys
>WENV170070855
CDZQ01037786
412834
Actinomycetota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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