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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170070332
CDZQ01021918
339630
Bacillota
GCC
Gly
>WENV170069958
CDZQ01007957
158247
Bacillota
>WENV170070956
CDZQ01041441
144612
Bacillota
TCT
Arg
>WENV170070077
CDZQ01013635
235134
Bacillota
GAA
Phe
>WENV170070175
CDZQ01016031
235134
Bacillota
GAA
Phe
>WENV170070783
CDZQ01036032
241441
Bacillota
GCC
Gly
>WENV170071329
CDZQ01053476
241441
Bacillota
GCC
Gly
>WENV170070644
CDZQ01031847
144577
Bacillota
GAT
Ile
>WENV170071116
CDZQ01046174
144577
Bacillota
GAT
Ile
>WENV170071482
CDZQ01057894
238910
Bacillota
CTT
Lys
>WENV170071565
CDZQ01060734
238910
Bacillota
CTT
Lys
>WENV170070716
CDZQ01033900
238910
Bacillota
CTT
Lys
>WENV170070073
CDZQ01013252
341763
Bacillota
CTC
Glu
>WENV170070434
CDZQ01026497
341763
Bacillota
CTC
Glu
>WENV170070337
CDZQ01021918
37083
Bacillota
TGA
Ser
>WENV170071187
CDZQ01048777
148104
Bacillota
CAT
Met
>WENV170070707
CDZQ01033557
169927
Bacillota
GTC
Asp
>WENV170070748
CDZQ01035069
169927
Bacillota
GTC
Asp
>WENV170070533
CDZQ01028718
235117
Bacillota
TAC
Val
>WENV170070537
CDZQ01028718
235117
Bacillota
TAC
Val
>WENV170070535
CDZQ01028718
235079
Bacillota
GAA
Phe
>WENV170070539
CDZQ01028718
235079
Bacillota
GAA
Phe
>WENV170070708
CDZQ01033557
257952
Bacillota
TGT
Thr
>WENV170070749
CDZQ01035069
257952
Bacillota
TGT
Thr
>WENV170069713
CDZQ01001398
413152
Bacillota
TCC
Gly
>WENV170070830
CDZQ01036933
413152
Bacillota
TCC
Gly
>WENV170071089
CDZQ01045484
413152
Bacillota
TCC
Gly
>WENV170070705
CDZQ01033557
348433
Bacillota
TTC
Glu
>WENV170070746
CDZQ01035069
348433
Bacillota
TTC
Glu
>WENV170069795
CDZQ01003699
153911
Bacillota
GAT
Ile
>WENV170069937
CDZQ01007453
153911
Bacillota
GAT
Ile
>WENV170070646
CDZQ01031850
153911
Bacillota
GAT
Ile
>WENV170071152
CDZQ01047902
153911
Bacillota
GAT
Ile
>WENV170070078
CDZQ01013635
240017
Bacillota
GCC
Gly
>WENV170070176
CDZQ01016031
240017
Bacillota
GCC
Gly
>WENV170071507
CDZQ01058415
240017
Bacillota
GCC
Gly
>WENV170071193
CDZQ01048863
242249
Bacillota
TAC
Val
>WENV170070079
CDZQ01013635
263765
Bacillota
TAC
Val
>WENV170070805
CDZQ01036392
263765
Bacillota
TAC
Val
>WENV170071506
CDZQ01058415
263765
Bacillota
TAC
Val
>WENV170071535
CDZQ01060071
263765
Bacillota
TAC
Val
>WENV170069841
CDZQ01004698
235095
Bacillota
GGT
Thr
>WENV170070840
CDZQ01037344
235095
Bacillota
GGT
Thr
>WENV170070971
CDZQ01042025
344183
Bacillota
CTG
Gln
>WENV170070849
CDZQ01037566
419945
Bacillota
GCA
Cys
>WENV170071045
CDZQ01044619
419945
Bacillota
GCA
Cys
>WENV170071205
CDZQ01048923
419945
Bacillota
GCA
Cys
>WENV170071536
CDZQ01060071
154748
Bacillota
GTC
Asp
>WENV170069961
CDZQ01007967
245386
Bacillota
CCA
Trp
>WENV170070386
CDZQ01024312
245386
Bacillota
CCA
Trp
>WENV170070438
CDZQ01026497
245386
Bacillota
CCA
Trp
>WENV170071200
CDZQ01048867
245386
Bacillota
CCA
Trp
>WENV170070340
CDZQ01021918
154711
Bacillota
TGG
Pro
>WENV170069854
CDZQ01004698
345314
Bacillota
TTG
Gln
>WENV170069884
CDZQ01005695
345314
Bacillota
TTG
Gln
>WENV170070145
CDZQ01015548
345314
Bacillota
TTG
Gln
>WENV170069962
CDZQ01007967
157838
Bacillota
GTC
Asp
>WENV170070329
CDZQ01021918
157838
Bacillota
GTC
Asp
>WENV170071194
CDZQ01048863
157838
Bacillota
GTC
Asp
>WENV170071415
CDZQ01056338
157838
Bacillota
GTC
Asp
>WENV170070719
CDZQ01034385
247734
Bacillota
TGC
Ala
>WENV170071010
CDZQ01043683
247734
Bacillota
TGC
Ala
>WENV170071499
CDZQ01058410
339828
Bacillota
TTC
Glu
>WENV170070017
CDZQ01010604
248965
Bacillota
GCC
Gly
>WENV170071417
CDZQ01056338
248965
Bacillota
GCC
Gly
>WENV170070341
CDZQ01021918
148144
Bacillota
CAT
Met
>WENV170070328
CDZQ01021918
263523
Bacillota
TAC
Val
>WENV170069756
CDZQ01002341
338128
Bacillota
TTC
Glu
>WENV170070224
CDZQ01018062
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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