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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170069720
CDZQ01001404
119661
Verrucomicrobiota
CAA
Leu
>WENV170070947
CDZQ01041173
155256
Verrucomicrobiota
TCT
Arg
>WENV170070946
CDZQ01041173
246701
Verrucomicrobiota
TTT
Lys
>WENV170071318
CDZQ01053074
345141
Verrucomicrobiota
TTG
Gln
>WENV170069820
CDZQ01004185
345133
Verrucomicrobiota
GAC
Val
>WENV170071338
CDZQ01053898
82054
Verrucomicrobiota
GTA
Tyr
>WENV170069997
CDZQ01009632
246677
Verrucomicrobiota
CTT
Lys
>WENV170069998
CDZQ01009632
246677
Verrucomicrobiota
CTT
Lys
>WENV170070033
CDZQ01011822
344844
Verrucomicrobiota
GCA
Cys
>WENV170070529
CDZQ01028462
155264
Verrucomicrobiota
GGG
Pro
>WENV170069819
CDZQ01004185
344845
Verrucomicrobiota
CTG
Gln
>WENV170069821
CDZQ01004185
128202
Verrucomicrobiota
GTC
Asp
>WENV170070948
CDZQ01041173
128202
Verrucomicrobiota
GTC
Asp
>WENV170070886
CDZQ01039270
414625
Verrucomicrobiota
CCC
Gly
>WENV170069673
CDZQ01000400
46246
Verrucomicrobiota
TGA
Ser
>WENV170069721
CDZQ01001404
97755
Verrucomicrobiota
TAG
Leu
>WENV170069675
CDZQ01000400
246700
Verrucomicrobiota
TTC
Glu
>WENV170070034
CDZQ01011822
246700
Verrucomicrobiota
TTC
Glu
>WENV170069674
CDZQ01000400
347038
Verrucomicrobiota
GCC
Gly
>WENV170071317
CDZQ01053074
347038
Verrucomicrobiota
GCC
Gly
>WENV170070036
CDZQ01011822
246687
Verrucomicrobiota
CGC
Ala
>WENV170070885
CDZQ01039270
419909
Verrucomicrobiota
TCC
Gly
>WENV170071316
CDZQ01053074
344841
Verrucomicrobiota
CAC
Val
>WENV170070191
CDZQ01016980
60880
Verrucomicrobiota
CAG
Leu
>WENV170069723
CDZQ01001404
82056
Verrucomicrobiota
TAA
Leu
>WENV170069996
CDZQ01009632
344842
Verrucomicrobiota
CGT
Thr
>WENV170071340
CDZQ01053898
170105
Verrucomicrobiota
CAT
Met
>WENV170070035
CDZQ01011822
345123
Verrucomicrobiota
TGT
Thr
>WENV170069722
CDZQ01001404
345110
Verrucomicrobiota
CCT
Arg
>WENV170069676
CDZQ01000400
344839
Verrucomicrobiota
GTG
His
>WENV170070801
CDZQ01036050
7274
Verrucomicrobiota
CGA
Ser
>WENV170069724
CDZQ01001404
246260
Verrucomicrobiota
>WENV170069818
CDZQ01004184
155268
Verrucomicrobiota
CGG
Pro
>WENV170071213
CDZQ01049317
155268
Verrucomicrobiota
CGG
Pro
>WENV170070032
CDZQ01011822
82181
Verrucomicrobiota
AAG
Leu
>WENV170070527
CDZQ01028462
246728
Verrucomicrobiota
GAA
Phe
>WENV170069725
CDZQ01001404
7256
Verrucomicrobiota
GCT
Ser
>WENV170069672
CDZQ01000400
345115
Verrucomicrobiota
CAT
Met
>WENV170071053
CDZQ01044693
345119
Verrucomicrobiota
TAC
Val
>WENV170071337
CDZQ01053898
345124
Verrucomicrobiota
GTT
Asn
>WENV170071339
CDZQ01053898
17023
Verrucomicrobiota
GGA
Ser
>WENV170070800
CDZQ01036050
345142
Verrucomicrobiota
CCG
Arg
>WENV170069677
CDZQ01000400
246709
Verrucomicrobiota
CAT
Met
>WENV170070528
CDZQ01028462
154693
Verrucomicrobiota
TGG
Pro
>WENV170070993
CDZQ01043257
344751
Verrucomicrobiota
GGT
Thr
>WENV170071557
CDZQ01060713
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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