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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170073559
CDZS01020110
144612
Bacillota
TCT
Arg
>WENV170073982
CDZS01036022
144612
Bacillota
TCT
Arg
>WENV170074304
CDZS01047656
144612
Bacillota
TCT
Arg
>WENV170073278
CDZS01009575
267649
Bacillota
TAC
Val
>WENV170073628
CDZS01022727
267556
Bacillota
TAC
Val
>WENV170074234
CDZS01045266
235098
Bacillota
GAC
Val
>WENV170073217
CDZS01006771
148239
Bacillota
TCT
Arg
>WENV170073637
CDZS01023111
59312
Bacillota
CAG
Leu
>WENV170074153
CDZS01042209
59312
Bacillota
CAG
Leu
>WENV170073100
CDZS01002709
238910
Bacillota
CTT
Lys
>WENV170073604
CDZS01021859
338147
Bacillota
CTC
Glu
>WENV170073652
CDZS01024023
338147
Bacillota
CTC
Glu
>WENV170074149
CDZS01042161
338147
Bacillota
CTC
Glu
>WENV170073376
CDZS01013891
235150
Bacillota
TGC
Ala
>WENV170074282
CDZS01047082
235150
Bacillota
TGC
Ala
>WENV170073324
CDZS01011019
235114
Bacillota
TTT
Lys
>WENV170074151
CDZS01042209
44859
Bacillota
AAG
Leu
>WENV170074152
CDZS01042209
44859
Bacillota
AAG
Leu
>WENV170073218
CDZS01006771
156937
Bacillota
GTG
His
>WENV170073724
CDZS01027301
274189
Bacillota
TGT
Thr
>WENV170073099
CDZS01002709
173314
Bacillota
GAT
Ile
>WENV170073489
CDZS01017505
338149
Bacillota
CTC
Glu
>WENV170074479
CDZS01054247
271471
Bacillota
GCC
Gly
>WENV170073755
CDZS01028866
245298
Bacillota
CGG
Pro
>WENV170074216
CDZS01044666
245298
Bacillota
CGG
Pro
>WENV170073309
CDZS01010489
37269
Bacillota
TGA
Ser
>WENV170074459
CDZS01053832
37269
Bacillota
TGA
Ser
>WENV170074032
CDZS01038921
155089
Bacillota
CAT
Met
>WENV170073160
CDZS01004549
169968
Bacillota
CAT
Met
>WENV170073451
CDZS01016366
169968
Bacillota
CAT
Met
>WENV170073126
CDZS01003209
100326
Bacillota
GTA
Tyr
>WENV170073322
CDZS01011019
144610
Bacillota
GTG
His
>WENV170074127
CDZS01041222
144610
Bacillota
GTG
His
>WENV170074172
CDZS01042566
144610
Bacillota
GTG
His
>WENV170074158
CDZS01042509
411547
Bacillota
CTG
Gln
>WENV170074325
CDZS01048133
411547
Bacillota
CTG
Gln
>WENV170074155
CDZS01042262
4624
Bacillota
GCT
Ser
>WENV170073373
CDZS01013620
263765
Bacillota
TAC
Val
>WENV170073894
CDZS01033606
263765
Bacillota
TAC
Val
>WENV170073328
CDZS01011142
235095
Bacillota
GGT
Thr
>WENV170073475
CDZS01017181
235095
Bacillota
GGT
Thr
>WENV170073834
CDZS01031718
344183
Bacillota
CTG
Gln
>WENV170073073
CDZS01002184
411549
Bacillota
TTG
Gln
>WENV170073746
CDZS01028339
411549
Bacillota
TTG
Gln
>WENV170073223
CDZS01006780
235142
Bacillota
CTT
Lys
>WENV170074486
CDZS01054762
235142
Bacillota
CTT
Lys
>WENV170073103
CDZS01002709
245386
Bacillota
CCA
Trp
>WENV170073211
CDZS01006317
245386
Bacillota
CCA
Trp
>WENV170074110
CDZS01041196
245386
Bacillota
CCA
Trp
>WENV170073886
CDZS01033550
148188
Bacillota
CCG
Arg
>WENV170073259
CDZS01008565
256380
Bacillota
>WENV170073414
CDZS01015728
157838
Bacillota
GTC
Asp
>WENV170073461
CDZS01016497
157838
Bacillota
GTC
Asp
>WENV170073274
CDZS01009564
144583
Bacillota
ACG
Arg
>WENV170073981
CDZS01036001
144583
Bacillota
ACG
Arg
>WENV170073447
CDZS01016366
144652
Bacillota
GTC
Asp
>WENV170074323
CDZS01048036
144652
Bacillota
GTC
Asp
>WENV170073521
CDZS01019034
247734
Bacillota
TGC
Ala
>WENV170074442
CDZS01052571
235171
Bacillota
CCA
Trp
>WENV170073476
CDZS01017208
238974
Bacillota
GAA
Phe
>WENV170073133
CDZS01003849
144621
Bacillota
GTT
Asn
>WENV170073582
CDZS01020880
144621
Bacillota
GTT
Asn
>WENV170074109
CDZS01041145
144621
Bacillota
GTT
Asn
>WENV170074317
CDZS01048005
235113
Bacillota
GAA
Phe
>WENV170073497
CDZS01017832
148495
Bacillota
TCT
Arg
>WENV170073867
CDZS01032649
58712
Bacillota
CAG
Leu
>WENV170073988
CDZS01036104
245296
Bacillota
CCC
Gly
>WENV170073136
CDZS01004106
248965
Bacillota
GCC
Gly
>WENV170073463
CDZS01016497
248965
Bacillota
GCC
Gly
>WENV170074508
CDZS01055569
248965
Bacillota
GCC
Gly
>WENV170073722
CDZS01027132
144594
Bacillota
CAC
Val
>WENV170074156
CDZS01042424
144594
Bacillota
CAC
Val
>WENV170073598
CDZS01021374
95563
Bacillota
GTA
Tyr
>WENV170073857
CDZS01032265
414486
Bacillota
CCC
Gly
>WENV170073161
CDZS01004549
272488
Bacillota
GAA
Phe
>WENV170073381
CDZS01013923
272488
Bacillota
GAA
Phe
>WENV170073395
CDZS01014478
272488
Bacillota
GAA
Phe
>WENV170073452
CDZS01016366
272488
Bacillota
GAA
Phe
>WENV170073316
CDZS01010966
114075
Bacillota
TAG
Leu
>WENV170073045
CDZS01000785
238945
Bacillota
GCC
Gly
>WENV170073046
CDZS01000785
238945
Bacillota
GCC
Gly
>WENV170073047
CDZS01000785
238945
Bacillota
GCC
Gly
>WENV170073474
CDZS01017135
249259
Bacillota
GCC
Gly
>WENV170073098
CDZS01002709
273862
Bacillota
TGC
Ala
>WENV170073267
CDZS01009008
273862
Bacillota
TGC
Ala
>WENV170074445
CDZS01052638
273862
Bacillota
TGC
Ala
>WENV170073407
CDZS01015452
338128
Bacillota
TTC
Glu
>WENV170073644
CDZS01023562
338128
Bacillota
TTC
Glu
>WENV170073802
CDZS01031150
338128
Bacillota
TTC
Glu
>WENV170073848
CDZS01032118
338128
Bacillota
TTC
Glu
>WENV170073718
CDZS01026753
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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