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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
124 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170075255
CDZT01027554
235097
Bacteroidota
TTT
Lys
>WENV170075936
CDZT01051131
235102
Bacteroidota
CGT
Thr
>WENV170075967
CDZT01051252
144657
Bacteroidota
CGG
Pro
>WENV170074713
CDZT01005384
243025
Bacteroidota
CAT
Met
>WENV170074991
CDZT01017997
243025
Bacteroidota
CAT
Met
>WENV170076123
CDZT01057467
243025
Bacteroidota
CAT
Met
>WENV170076126
CDZT01057468
243025
Bacteroidota
CAT
Met
>WENV170075948
CDZT01051247
338155
Bacteroidota
CTC
Glu
>WENV170076151
CDZT01058027
339341
Bacteroidota
GGT
Thr
>WENV170075258
CDZT01027564
343138
Bacteroidota
CCT
Arg
>WENV170075527
CDZT01038023
58715
Bacteroidota
GAG
Leu
>WENV170075854
CDZT01048291
46165
Bacteroidota
TGA
Ser
>WENV170076203
CDZT01059527
46165
Bacteroidota
TGA
Ser
>WENV170074796
CDZT01008799
17323
Bacteroidota
GGA
Ser
>WENV170075912
CDZT01050223
17323
Bacteroidota
GGA
Ser
>WENV170074600
CDZT01001148
338486
Bacteroidota
CAT
Met
>WENV170074875
CDZT01012479
338486
Bacteroidota
CAT
Met
>WENV170075178
CDZT01024149
338486
Bacteroidota
CAT
Met
>WENV170075338
CDZT01030581
338486
Bacteroidota
CAT
Met
>WENV170075375
CDZT01032217
338486
Bacteroidota
CAT
Met
>WENV170075445
CDZT01034497
415410
Bacteroidota
TTG
Gln
>WENV170075888
CDZT01049669
415410
Bacteroidota
TTG
Gln
>WENV170075897
CDZT01050218
415410
Bacteroidota
TTG
Gln
>WENV170074664
CDZT01003961
59689
Bacteroidota
CAG
Leu
>WENV170074604
CDZT01001595
80835
Bacteroidota
GTA
Tyr
>WENV170076193
CDZT01058690
80835
Bacteroidota
GTA
Tyr
>WENV170076281
CDZT01063219
237247
Bacteroidota
TTT
Lys
>WENV170075867
CDZT01049070
344692
Bacteroidota
GGT
Thr
>WENV170076201
CDZT01059527
344692
Bacteroidota
GGT
Thr
>WENV170074962
CDZT01017464
145504
Bacteroidota
TGT
Thr
>WENV170075052
CDZT01020111
341950
Bacteroidota
>WENV170075287
CDZT01028615
341950
Bacteroidota
>WENV170075866
CDZT01049070
341950
Bacteroidota
>WENV170076231
CDZT01060779
341950
Bacteroidota
>WENV170076219
CDZT01060326
338124
Bacteroidota
CCG
Arg
>WENV170075241
CDZT01027505
238121
Bacteroidota
CTT
Lys
>WENV170075242
CDZT01027505
238121
Bacteroidota
CTT
Lys
>WENV170075044
CDZT01019773
126641
Bacteroidota
TAC
Val
>WENV170075437
CDZT01034041
338132
Bacteroidota
GCA
Cys
>WENV170075821
CDZT01047238
338132
Bacteroidota
GCA
Cys
>WENV170075914
CDZT01050241
338132
Bacteroidota
GCA
Cys
>WENV170075925
CDZT01050749
338132
Bacteroidota
GCA
Cys
>WENV170075154
CDZT01023302
235165
Bacteroidota
CCA
Trp
>WENV170075093
CDZT01021690
144933
Bacteroidota
TCT
Arg
>WENV170075921
CDZT01050707
144933
Bacteroidota
TCT
Arg
>WENV170075824
CDZT01047241
144656
Bacteroidota
GTG
His
>WENV170074570
CDZT01000545
235207
Bacteroidota
CAT
Met
>WENV170074999
CDZT01018114
235207
Bacteroidota
CAT
Met
>WENV170075015
CDZT01019115
235207
Bacteroidota
CAT
Met
>WENV170076289
CDZT01063379
235207
Bacteroidota
CAT
Met
>WENV170074914
CDZT01014528
144659
Bacteroidota
GTG
His
>WENV170074814
CDZT01009879
80607
Bacteroidota
GTA
Tyr
>WENV170075160
CDZT01023675
80607
Bacteroidota
GTA
Tyr
>WENV170075391
CDZT01032753
80607
Bacteroidota
GTA
Tyr
>WENV170075020
CDZT01019559
113604
Bacteroidota
>WENV170075325
CDZT01030101
113604
Bacteroidota
>WENV170075928
CDZT01051131
113604
Bacteroidota
>WENV170075931
CDZT01051131
113604
Bacteroidota
>WENV170075934
CDZT01051131
113604
Bacteroidota
>WENV170075364
CDZT01031695
80614
Bacteroidota
>WENV170075523
CDZT01038021
80614
Bacteroidota
>WENV170075997
CDZT01052355
80614
Bacteroidota
>WENV170076150
CDZT01058027
80614
Bacteroidota
>WENV170074708
CDZT01005384
154643
Bacteroidota
CAT
Met
>WENV170074994
CDZT01017997
154643
Bacteroidota
CAT
Met
>WENV170075765
CDZT01044812
154643
Bacteroidota
CAT
Met
>WENV170076196
CDZT01058690
154643
Bacteroidota
CAT
Met
>WENV170076277
CDZT01063218
154643
Bacteroidota
CAT
Met
>WENV170075398
CDZT01032852
144590
Bacteroidota
GTT
Asn
>WENV170075399
CDZT01032852
144590
Bacteroidota
GTT
Asn
>WENV170075513
CDZT01037469
144590
Bacteroidota
GTT
Asn
>WENV170075514
CDZT01037469
144590
Bacteroidota
GTT
Asn
>WENV170075515
CDZT01037469
144590
Bacteroidota
GTT
Asn
>WENV170075516
CDZT01037469
144590
Bacteroidota
GTT
Asn
>WENV170075840
CDZT01047810
95559
Bacteroidota
TAG
Leu
>WENV170075266
CDZT01028068
419272
Bacteroidota
CTG
Gln
>WENV170075011
CDZT01018618
144655
Bacteroidota
GGC
Ala
>WENV170075214
CDZT01026141
144655
Bacteroidota
GGC
Ala
>WENV170076267
CDZT01062548
144655
Bacteroidota
GGC
Ala
>WENV170075417
CDZT01033337
144639
Bacteroidota
GGC
Ala
>WENV170075511
CDZT01037003
338164
Bacteroidota
TTC
Glu
>WENV170075144
CDZT01023214
95875
Bacteroidota
TAG
Leu
>WENV170075339
CDZT01030581
240012
Bacteroidota
CCC
Gly
>WENV170076205
CDZT01059584
44852
Bacteroidota
TAA
Leu
>WENV170075739
CDZT01044306
147439
Bacteroidota
TCT
Arg
>WENV170074751
CDZT01006360
150485
Bacteroidota
GTT
Asn
>WENV170074752
CDZT01006360
150485
Bacteroidota
GTT
Asn
>WENV170074753
CDZT01006360
150485
Bacteroidota
GTT
Asn
>WENV170075833
CDZT01047743
411550
Bacteroidota
CTG
Gln
>WENV170074872
CDZT01012477
19528
Bacteroidota
GGA
Ser
>WENV170074742
CDZT01006247
50727
Bacteroidota
TGA
Ser
>WENV170074758
CDZT01006852
50727
Bacteroidota
TGA
Ser
>WENV170075418
CDZT01033339
50727
Bacteroidota
TGA
Ser
>WENV170075452
CDZT01035008
50727
Bacteroidota
TGA
Ser
>WENV170075462
CDZT01035017
132360
Bacteroidota
GGG
Pro
>WENV170076280
CDZT01063218
132360
Bacteroidota
GGG
Pro
>WENV170075265
CDZT01028068
132360
Bacteroidota
GGG
Pro
>WENV170074846
CDZT01011381
425638
Bacteroidota
CTG
Gln
>WENV170075533
CDZT01038557
425638
Bacteroidota
CTG
Gln
>WENV170076144
CDZT01057549
425638
Bacteroidota
CTG
Gln
>WENV170075032
CDZT01019594
353927
Bacteroidota
TTC
Glu
>WENV170076224
CDZT01060452
353927
Bacteroidota
TTC
Glu
>WENV170076225
CDZT01060452
353927
Bacteroidota
TTC
Glu
>WENV170076240
CDZT01060846
353927
Bacteroidota
TTC
Glu
>WENV170075362
CDZT01031695
185921
Bacteroidota
GTC
Asp
>WENV170075636
CDZT01040997
185921
Bacteroidota
GTC
Asp
>WENV170076214
CDZT01060308
185921
Bacteroidota
GTC
Asp
>WENV170074603
CDZT01001595
146530
Bacteroidota
TGT
Thr
>WENV170075766
CDZT01044812
146530
Bacteroidota
TGT
Thr
>WENV170074757
CDZT01006850
23696
Bacteroidota
GCT
Ser
>WENV170075947
CDZT01051247
23696
Bacteroidota
GCT
Ser
>WENV170074596
CDZT01001058
414426
Bacteroidota
CTG
Gln
>WENV170075502
CDZT01036896
414426
Bacteroidota
CTG
Gln
>WENV170076322
CDZT01064386
16224
Bacteroidota
GGA
Ser
>WENV170074864
CDZT01011910
151960
Bacteroidota
GGC
Ala
>WENV170074985
CDZT01017995
151960
Bacteroidota
GGC
Ala
>WENV170075978
CDZT01051816
151960
Bacteroidota
GGC
Ala
>WENV170075267
CDZT01028068
16220
Bacteroidota
GGA
Ser
>WENV170076161
CDZT01058027
235129
Bacteroidota
GCC
Gly
>WENV170076163
CDZT01058027
235129
Bacteroidota
GCC
Gly
>WENV170076164
CDZT01058027
235129
Bacteroidota
GCC
Gly
>WENV170075271
CDZT01028126
235129
Bacteroidota
GCC
Gly
>WENV170075525
CDZT01038023
235129
Bacteroidota
GCC
Gly
>WENV170076159
CDZT01058027
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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