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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077227
CDZU01025122
202812
Bacillota
CAT
Met
>WENV170077263
CDZU01026773
202812
Bacillota
CAT
Met
>WENV170077274
CDZU01027078
44854
Bacillota
TGA
Ser
>WENV170077212
CDZU01024566
425593
Bacillota
CCC
Gly
>WENV170076653
CDZU01009633
37549
Bacillota
TAA
Leu
>WENV170077328
CDZU01028747
193585
Bacillota
CGG
Pro
>WENV170077330
CDZU01028747
193585
Bacillota
CGG
Pro
>WENV170077084
CDZU01021266
238910
Bacillota
CTT
Lys
>WENV170076906
CDZU01016594
243119
Bacillota
CTT
Lys
>WENV170076799
CDZU01013530
152047
Bacillota
GGG
Pro
>WENV170076328
CDZU01000370
16820
Bacillota
GCT
Ser
>WENV170077568
CDZU01034970
152512
Bacillota
CCT
Arg
>WENV170076649
CDZU01009633
152459
Bacillota
GTC
Asp
>WENV170077196
CDZU01024136
152459
Bacillota
GTC
Asp
>WENV170077199
CDZU01024136
152459
Bacillota
GTC
Asp
>WENV170077202
CDZU01024136
152459
Bacillota
GTC
Asp
>WENV170076382
CDZU01001799
429429
Bacillota
CCA
Trp
>WENV170077446
CDZU01032404
313454
Bacillota
GAA
Phe
>WENV170076499
CDZU01005162
11034
Bacillota
GGA
Ser
>WENV170077394
CDZU01030983
11034
Bacillota
GGA
Ser
>WENV170077329
CDZU01028747
10943
Bacillota
GGA
Ser
>WENV170077331
CDZU01028747
10943
Bacillota
GGA
Ser
>WENV170076330
CDZU01000370
342736
Bacillota
TTG
Gln
>WENV170076766
CDZU01012459
235079
Bacillota
GAA
Phe
>WENV170077359
CDZU01029474
296878
Bacillota
GTT
Asn
>WENV170077439
CDZU01032393
296878
Bacillota
GTT
Asn
>WENV170077563
CDZU01034970
296878
Bacillota
GTT
Asn
>WENV170076812
CDZU01013855
173314
Bacillota
GAT
Ile
>WENV170077850
CDZU01044829
152513
Bacillota
GAC
Val
>WENV170077712
CDZU01038964
338149
Bacillota
CTC
Glu
>WENV170077042
CDZU01019621
271471
Bacillota
GCC
Gly
>WENV170077030
CDZU01019335
245298
Bacillota
CGG
Pro
>WENV170077010
CDZU01018948
37551
Bacillota
CGA
Ser
>WENV170077198
CDZU01024136
81644
Bacillota
GAG
Leu
>WENV170077201
CDZU01024136
81644
Bacillota
GAG
Leu
>WENV170077279
CDZU01027235
201704
Bacillota
GAT
Ile
>WENV170076764
CDZU01012459
235078
Bacillota
TAC
Val
>WENV170076348
CDZU01001011
153911
Bacillota
GAT
Ile
>WENV170076594
CDZU01008035
411547
Bacillota
CTG
Gln
>WENV170076913
CDZU01016876
411547
Bacillota
CTG
Gln
>WENV170077029
CDZU01019335
411547
Bacillota
CTG
Gln
>WENV170077656
CDZU01037572
4624
Bacillota
GCT
Ser
>WENV170077275
CDZU01027078
4624
Bacillota
GCT
Ser
>WENV170076957
CDZU01018071
263765
Bacillota
TAC
Val
>WENV170077443
CDZU01032399
263765
Bacillota
TAC
Val
>WENV170077548
CDZU01034287
313164
Bacillota
TTT
Lys
>WENV170077361
CDZU01029474
248683
Bacillota
TTT
Lys
>WENV170077565
CDZU01034970
248683
Bacillota
TTT
Lys
>WENV170077437
CDZU01032393
243399
Bacillota
CCA
Trp
>WENV170077360
CDZU01029474
344183
Bacillota
CTG
Gln
>WENV170077564
CDZU01034970
344183
Bacillota
CTG
Gln
>WENV170076652
CDZU01009633
419945
Bacillota
GCA
Cys
>WENV170077340
CDZU01028996
419639
Bacillota
GCA
Cys
>WENV170077363
CDZU01029474
304759
Bacillota
TAC
Val
>WENV170077567
CDZU01034970
304759
Bacillota
TAC
Val
>WENV170077617
CDZU01036313
411549
Bacillota
TTG
Gln
>WENV170077373
CDZU01029917
411549
Bacillota
TTG
Gln
>WENV170077009
CDZU01018947
152045
Bacillota
CAT
Met
>WENV170077362
CDZU01029474
243398
Bacillota
TTC
Glu
>WENV170077440
CDZU01032393
243398
Bacillota
TTC
Glu
>WENV170077566
CDZU01034970
243398
Bacillota
TTC
Glu
>WENV170076334
CDZU01000391
37588
Bacillota
TGA
Ser
>WENV170077278
CDZU01027213
148188
Bacillota
CCG
Arg
>WENV170076504
CDZU01005410
152046
Bacillota
TCT
Arg
>WENV170077357
CDZU01029446
152051
Bacillota
ACG
Arg
>WENV170077438
CDZU01032393
152051
Bacillota
ACG
Arg
>WENV170077545
CDZU01034183
243401
Bacillota
CGT
Thr
>WENV170076355
CDZU01001034
298620
Bacillota
CAT
Met
>WENV170077187
CDZU01024109
157838
Bacillota
GTC
Asp
>WENV170077445
CDZU01032404
157838
Bacillota
GTC
Asp
>WENV170077676
CDZU01038146
157838
Bacillota
GTC
Asp
>WENV170076914
CDZU01016942
247734
Bacillota
TGC
Ala
>WENV170077798
CDZU01042008
144621
Bacillota
GTT
Asn
>WENV170077047
CDZU01019676
277200
Bacillota
GGC
Ala
>WENV170077425
CDZU01031993
243098
Bacillota
GGT
Thr
>WENV170076774
CDZU01012686
344240
Bacillota
GCC
Gly
>WENV170077339
CDZU01028996
344240
Bacillota
GCC
Gly
>WENV170077715
CDZU01039211
344240
Bacillota
GCC
Gly
>WENV170077008
CDZU01018947
281472
Bacillota
GGT
Thr
>WENV170076582
CDZU01007743
196632
Bacillota
GTC
Asp
>WENV170077337
CDZU01028996
196632
Bacillota
GTC
Asp
>WENV170077714
CDZU01039211
196632
Bacillota
GTC
Asp
>WENV170076948
CDZU01017813
144594
Bacillota
CAC
Val
>WENV170076978
CDZU01018453
338127
Bacillota
TTG
Gln
>WENV170077721
CDZU01039322
338128
Bacillota
TTC
Glu
>WENV170077724
CDZU01039519
338128
Bacillota
TTC
Glu
>WENV170076583
CDZU01007743
245344
Bacillota
GAA
Phe
>WENV170077338
CDZU01028996
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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