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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170080013
CDZW01028684
235097
Bacteroidota
TTT
Lys
>WENV170080122
CDZW01032056
235097
Bacteroidota
TTT
Lys
>WENV170079346
CDZW01001661
235102
Bacteroidota
CGT
Thr
>WENV170079379
CDZW01002526
243025
Bacteroidota
CAT
Met
>WENV170079712
CDZW01015809
243025
Bacteroidota
CAT
Met
>WENV170079738
CDZW01016553
243025
Bacteroidota
CAT
Met
>WENV170079766
CDZW01018186
338155
Bacteroidota
CTC
Glu
>WENV170080004
CDZW01028287
338155
Bacteroidota
CTC
Glu
>WENV170079934
CDZW01025079
17323
Bacteroidota
GGA
Ser
>WENV170079467
CDZW01005765
411543
Bacteroidota
CTG
Gln
>WENV170079500
CDZW01006960
436206
Bacteroidota
TTG
Gln
>WENV170079563
CDZW01009480
436206
Bacteroidota
TTG
Gln
>WENV170079727
CDZW01015912
436206
Bacteroidota
TTG
Gln
>WENV170080386
CDZW01044436
436206
Bacteroidota
TTG
Gln
>WENV170080156
CDZW01032866
344692
Bacteroidota
GGT
Thr
>WENV170080003
CDZW01028283
338124
Bacteroidota
CCG
Arg
>WENV170080443
CDZW01046245
238121
Bacteroidota
CTT
Lys
>WENV170079635
CDZW01011999
126641
Bacteroidota
TAC
Val
>WENV170079636
CDZW01011999
126641
Bacteroidota
TAC
Val
>WENV170079637
CDZW01011999
126641
Bacteroidota
TAC
Val
>WENV170080143
CDZW01032766
126641
Bacteroidota
TAC
Val
>WENV170080144
CDZW01032766
126641
Bacteroidota
TAC
Val
>WENV170079518
CDZW01007872
338132
Bacteroidota
GCA
Cys
>WENV170079821
CDZW01020026
338132
Bacteroidota
GCA
Cys
>WENV170079841
CDZW01020774
338132
Bacteroidota
GCA
Cys
>WENV170080176
CDZW01033630
338132
Bacteroidota
GCA
Cys
>WENV170079329
CDZW01001143
193809
Bacteroidota
CAT
Met
>WENV170079571
CDZW01009563
301449
Bacteroidota
CGG
Pro
>WENV170079724
CDZW01015907
301449
Bacteroidota
CGG
Pro
>WENV170079763
CDZW01018121
301449
Bacteroidota
CGG
Pro
>WENV170080424
CDZW01045526
301449
Bacteroidota
CGG
Pro
>WENV170079933
CDZW01024922
144933
Bacteroidota
TCT
Arg
>WENV170080092
CDZW01030927
144656
Bacteroidota
GTG
His
>WENV170079806
CDZW01019682
235207
Bacteroidota
CAT
Met
>WENV170080123
CDZW01032056
235207
Bacteroidota
CAT
Met
>WENV170079513
CDZW01007567
143169
Bacteroidota
GGG
Pro
>WENV170079650
CDZW01012399
143169
Bacteroidota
GGG
Pro
>WENV170080254
CDZW01037317
143169
Bacteroidota
GGG
Pro
>WENV170080455
CDZW01046630
143169
Bacteroidota
GGG
Pro
>WENV170079468
CDZW01005769
80607
Bacteroidota
GTA
Tyr
>WENV170079653
CDZW01012709
80607
Bacteroidota
GTA
Tyr
>WENV170079755
CDZW01017780
80607
Bacteroidota
GTA
Tyr
>WENV170079853
CDZW01021279
80607
Bacteroidota
GTA
Tyr
>WENV170080421
CDZW01045526
80607
Bacteroidota
GTA
Tyr
>WENV170079359
CDZW01002127
113604
Bacteroidota
>WENV170079362
CDZW01002127
113604
Bacteroidota
>WENV170080326
CDZW01041304
113604
Bacteroidota
>WENV170080329
CDZW01041304
113604
Bacteroidota
>WENV170080332
CDZW01041304
113604
Bacteroidota
>WENV170079478
CDZW01006035
154643
Bacteroidota
CAT
Met
>WENV170080314
CDZW01040897
154643
Bacteroidota
CAT
Met
>WENV170080453
CDZW01046622
154643
Bacteroidota
CAT
Met
>WENV170080010
CDZW01028683
144590
Bacteroidota
GTT
Asn
>WENV170080011
CDZW01028683
144590
Bacteroidota
GTT
Asn
>WENV170080012
CDZW01028683
144590
Bacteroidota
GTT
Asn
>WENV170080417
CDZW01045526
144590
Bacteroidota
GTT
Asn
>WENV170080418
CDZW01045526
144590
Bacteroidota
GTT
Asn
>WENV170080419
CDZW01045526
144590
Bacteroidota
GTT
Asn
>WENV170080238
CDZW01036622
95559
Bacteroidota
TAG
Leu
>WENV170080132
CDZW01032455
144655
Bacteroidota
GGC
Ala
>WENV170079875
CDZW01022393
44852
Bacteroidota
TAA
Leu
>WENV170080491
CDZW01048418
19528
Bacteroidota
GGA
Ser
>WENV170079409
CDZW01003615
425638
Bacteroidota
CTG
Gln
>WENV170080388
CDZW01044445
425638
Bacteroidota
CTG
Gln
>WENV170080401
CDZW01044895
425638
Bacteroidota
CTG
Gln
>WENV170079666
CDZW01013201
94703
Bacteroidota
GTA
Tyr
>WENV170079799
CDZW01019633
94703
Bacteroidota
GTA
Tyr
>WENV170079914
CDZW01024341
94703
Bacteroidota
GTA
Tyr
>WENV170079998
CDZW01028280
94703
Bacteroidota
GTA
Tyr
>WENV170080354
CDZW01042419
94703
Bacteroidota
GTA
Tyr
>WENV170080302
CDZW01040099
353927
Bacteroidota
TTC
Glu
>WENV170079795
CDZW01019330
185921
Bacteroidota
GTC
Asp
>WENV170079765
CDZW01018186
23696
Bacteroidota
GCT
Ser
>WENV170079764
CDZW01018143
414426
Bacteroidota
CTG
Gln
>WENV170080072
CDZW01030549
414426
Bacteroidota
CTG
Gln
>WENV170080492
CDZW01048611
414426
Bacteroidota
CTG
Gln
>WENV170079849
CDZW01021113
56823
Bacteroidota
TGA
Ser
>WENV170079939
CDZW01025454
56823
Bacteroidota
TGA
Ser
>WENV170080091
CDZW01030927
56823
Bacteroidota
TGA
Ser
>WENV170080171
CDZW01033607
56823
Bacteroidota
TGA
Ser
>WENV170080180
CDZW01033993
48914
Bacteroidota
TGA
Ser
>WENV170080026
CDZW01029438
16224
Bacteroidota
GGA
Ser
>WENV170080231
CDZW01036243
16224
Bacteroidota
GGA
Ser
>WENV170079345
CDZW01001654
151960
Bacteroidota
GGC
Ala
>WENV170079323
CDZW01000792
16220
Bacteroidota
GGA
Ser
>WENV170079373
CDZW01002492
338125
Bacteroidota
CCT
Arg
>WENV170079657
CDZW01012827
338125
Bacteroidota
CCT
Arg
>WENV170079741
CDZW01016923
338125
Bacteroidota
CCT
Arg
>WENV170080398
CDZW01044848
338125
Bacteroidota
CCT
Arg
>WENV170080467
CDZW01047421
338125
Bacteroidota
CCT
Arg
>WENV170079483
CDZW01006400
313363
Bacteroidota
GAA
Phe
>WENV170079778
CDZW01018611
313363
Bacteroidota
GAA
Phe
>WENV170080369
CDZW01043989
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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