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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170080508
CDZX01000019
235097
Bacteroidota
TTT
Lys
>WENV170080855
CDZX01024014
235097
Bacteroidota
TTT
Lys
>WENV170080876
CDZX01026114
235097
Bacteroidota
TTT
Lys
>WENV170080853
CDZX01023999
235102
Bacteroidota
CGT
Thr
>WENV170080988
CDZX01032750
144657
Bacteroidota
CGG
Pro
>WENV170080874
CDZX01025888
243025
Bacteroidota
CAT
Met
>WENV170080565
CDZX01003948
338155
Bacteroidota
CTC
Glu
>WENV170080661
CDZX01009805
338155
Bacteroidota
CTC
Glu
>WENV170080674
CDZX01011389
339341
Bacteroidota
GGT
Thr
>WENV170080719
CDZX01014015
58715
Bacteroidota
GAG
Leu
>WENV170080510
CDZX01000231
46165
Bacteroidota
TGA
Ser
>WENV170080766
CDZX01016715
95618
Bacteroidota
TAG
Leu
>WENV170080682
CDZX01011467
338486
Bacteroidota
CAT
Met
>WENV170080735
CDZX01014685
338486
Bacteroidota
CAT
Met
>WENV170080826
CDZX01021396
338486
Bacteroidota
CAT
Met
>WENV170080888
CDZX01026411
338486
Bacteroidota
CAT
Met
>WENV170080864
CDZX01024775
415410
Bacteroidota
TTG
Gln
>WENV170080911
CDZX01028314
415410
Bacteroidota
TTG
Gln
>WENV170080917
CDZX01028950
415410
Bacteroidota
TTG
Gln
>WENV170080561
CDZX01003764
59689
Bacteroidota
CAG
Leu
>WENV170080670
CDZX01010208
59689
Bacteroidota
CAG
Leu
>WENV170080846
CDZX01022949
235182
Bacteroidota
>WENV170080836
CDZX01022167
338124
Bacteroidota
CCG
Arg
>WENV170080584
CDZX01005764
238121
Bacteroidota
CTT
Lys
>WENV170080597
CDZX01006776
238121
Bacteroidota
CTT
Lys
>WENV170080880
CDZX01026390
238121
Bacteroidota
CTT
Lys
>WENV170080881
CDZX01026390
238121
Bacteroidota
CTT
Lys
>WENV170080882
CDZX01026390
238121
Bacteroidota
CTT
Lys
>WENV170080883
CDZX01026390
238121
Bacteroidota
CTT
Lys
>WENV170080574
CDZX01004510
126641
Bacteroidota
TAC
Val
>WENV170080575
CDZX01004510
126641
Bacteroidota
TAC
Val
>WENV170080529
CDZX01001043
338132
Bacteroidota
GCA
Cys
>WENV170080582
CDZX01005747
338132
Bacteroidota
GCA
Cys
>WENV170080689
CDZX01012414
338132
Bacteroidota
GCA
Cys
>WENV170080693
CDZX01012508
338132
Bacteroidota
GCA
Cys
>WENV170080767
CDZX01016722
338132
Bacteroidota
GCA
Cys
>WENV170080848
CDZX01022960
338132
Bacteroidota
GCA
Cys
>WENV170080637
CDZX01008544
144688
Bacteroidota
CAT
Met
>WENV170080598
CDZX01006776
45423
Bacteroidota
TGA
Ser
>WENV170080749
CDZX01015715
193809
Bacteroidota
CAT
Met
>WENV170080790
CDZX01019048
181746
Bacteroidota
GGC
Ala
>WENV170080593
CDZX01006322
301449
Bacteroidota
CGG
Pro
>WENV170080629
CDZX01008420
301449
Bacteroidota
CGG
Pro
>WENV170080871
CDZX01025594
301449
Bacteroidota
CGG
Pro
>WENV170080916
CDZX01028759
301449
Bacteroidota
CGG
Pro
>WENV170080982
CDZX01032592
301449
Bacteroidota
CGG
Pro
>WENV170080602
CDZX01006844
144656
Bacteroidota
GTG
His
>WENV170080716
CDZX01014013
235207
Bacteroidota
CAT
Met
>WENV170080859
CDZX01024497
235207
Bacteroidota
CAT
Met
>WENV170080980
CDZX01032489
235207
Bacteroidota
CAT
Met
>WENV170080981
CDZX01032489
235207
Bacteroidota
CAT
Met
>WENV170080831
CDZX01021674
144659
Bacteroidota
GTG
His
>WENV170080639
CDZX01008607
80607
Bacteroidota
GTA
Tyr
>WENV170080828
CDZX01021430
80607
Bacteroidota
GTA
Tyr
>WENV170080833
CDZX01021915
80607
Bacteroidota
GTA
Tyr
>WENV170080524
CDZX01001026
113604
Bacteroidota
>WENV170080527
CDZX01001026
113604
Bacteroidota
>WENV170080706
CDZX01013496
113604
Bacteroidota
>WENV170080709
CDZX01013496
113604
Bacteroidota
>WENV170080958
CDZX01031157
113604
Bacteroidota
>WENV170080961
CDZX01031157
113604
Bacteroidota
>WENV170080804
CDZX01019591
16999
Bacteroidota
GGA
Ser
>WENV170080533
CDZX01001354
80614
Bacteroidota
>WENV170080540
CDZX01002053
80614
Bacteroidota
>WENV170080700
CDZX01012957
52358
Bacteroidota
TGA
Ser
>WENV170080752
CDZX01015761
52358
Bacteroidota
TGA
Ser
>WENV170080901
CDZX01027519
52358
Bacteroidota
TGA
Ser
>WENV170080954
CDZX01031119
52358
Bacteroidota
TGA
Ser
>WENV170080809
CDZX01019822
154643
Bacteroidota
CAT
Met
>WENV170080966
CDZX01031967
144590
Bacteroidota
GTT
Asn
>WENV170080967
CDZX01031967
144590
Bacteroidota
GTT
Asn
>WENV170080889
CDZX01026412
95559
Bacteroidota
TAG
Leu
>WENV170080668
CDZX01010181
144655
Bacteroidota
GGC
Ala
>WENV170080860
CDZX01024533
144655
Bacteroidota
GGC
Ala
>WENV170080712
CDZX01013711
338164
Bacteroidota
TTC
Glu
>WENV170080713
CDZX01013711
338164
Bacteroidota
TTC
Glu
>WENV170080618
CDZX01007490
95875
Bacteroidota
TAG
Leu
>WENV170080830
CDZX01021665
95875
Bacteroidota
TAG
Leu
>WENV170080558
CDZX01003701
44852
Bacteroidota
TAA
Leu
>WENV170080592
CDZX01006320
44852
Bacteroidota
TAA
Leu
>WENV170080632
CDZX01008540
150485
Bacteroidota
GTT
Asn
>WENV170080633
CDZX01008540
150485
Bacteroidota
GTT
Asn
>WENV170080634
CDZX01008540
150485
Bacteroidota
GTT
Asn
>WENV170080635
CDZX01008540
150485
Bacteroidota
GTT
Asn
>WENV170080636
CDZX01008540
150485
Bacteroidota
GTT
Asn
>WENV170080587
CDZX01006012
132360
Bacteroidota
GGG
Pro
>WENV170080919
CDZX01029008
132360
Bacteroidota
GGG
Pro
>WENV170080965
CDZX01031691
132360
Bacteroidota
GGG
Pro
>WENV170080530
CDZX01001309
425638
Bacteroidota
CTG
Gln
>WENV170080698
CDZX01012627
353927
Bacteroidota
TTC
Glu
>WENV170080979
CDZX01032484
414426
Bacteroidota
CTG
Gln
>WENV170080803
CDZX01019572
16224
Bacteroidota
GGA
Ser
>WENV170080659
CDZX01009632
16220
Bacteroidota
GGA
Ser
>WENV170080943
CDZX01030104
338125
Bacteroidota
CCT
Arg
>WENV170080605
CDZX01007218
235129
Bacteroidota
GCC
Gly
>WENV170080607
CDZX01007218
235129
Bacteroidota
GCC
Gly
>WENV170080608
CDZX01007218
235129
Bacteroidota
GCC
Gly
>WENV170080610
CDZX01007218
235129
Bacteroidota
GCC
Gly
>WENV170080669
CDZX01010208
235129
Bacteroidota
GCC
Gly
>WENV170080717
CDZX01014015
235129
Bacteroidota
GCC
Gly
>WENV170080777
CDZX01017985
235129
Bacteroidota
GCC
Gly
>WENV170080774
CDZX01017532
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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