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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170081071
CDZY01003311
196621
Bacillota
GTC
Asp
>WENV170081091
CDZY01003690
196621
Bacillota
GTC
Asp
>WENV170081110
CDZY01004995
196621
Bacillota
GTC
Asp
>WENV170081222
CDZY01009439
196621
Bacillota
GTC
Asp
>WENV170082503
CDZY01056313
155958
Bacillota
GAT
Ile
>WENV170082428
CDZY01053196
309417
Bacillota
GGC
Ala
>WENV170082157
CDZY01041582
158247
Bacillota
>WENV170081063
CDZY01002919
144612
Bacillota
TCT
Arg
>WENV170081282
CDZY01011315
144612
Bacillota
TCT
Arg
>WENV170082009
CDZY01035453
144612
Bacillota
TCT
Arg
>WENV170082522
CDZY01056937
144612
Bacillota
TCT
Arg
>WENV170082477
CDZY01054681
267649
Bacillota
TAC
Val
>WENV170081386
CDZY01014245
235098
Bacillota
GAC
Val
>WENV170081912
CDZY01032824
235098
Bacillota
GAC
Val
>WENV170082236
CDZY01045276
235098
Bacillota
GAC
Val
>WENV170081701
CDZY01025030
148239
Bacillota
TCT
Arg
>WENV170081068
CDZY01003099
44854
Bacillota
TGA
Ser
>WENV170082355
CDZY01050886
44854
Bacillota
TGA
Ser
>WENV170081073
CDZY01003311
304022
Bacillota
GCC
Gly
>WENV170081095
CDZY01003727
304022
Bacillota
GCC
Gly
>WENV170081108
CDZY01004995
304022
Bacillota
GCC
Gly
>WENV170082392
CDZY01052450
304022
Bacillota
GCC
Gly
>WENV170081486
CDZY01017745
307003
Bacillota
TGC
Ala
>WENV170082312
CDZY01048369
59312
Bacillota
CAG
Leu
>WENV170081433
CDZY01015544
238910
Bacillota
CTT
Lys
>WENV170082526
CDZY01057182
238910
Bacillota
CTT
Lys
>WENV170081329
CDZY01011848
338147
Bacillota
CTC
Glu
>WENV170081628
CDZY01022693
338147
Bacillota
CTC
Glu
>WENV170081631
CDZY01022874
338147
Bacillota
CTC
Glu
>WENV170082366
CDZY01051388
338147
Bacillota
CTC
Glu
>WENV170082515
CDZY01056743
338147
Bacillota
CTC
Glu
>WENV170082516
CDZY01056743
338147
Bacillota
CTC
Glu
>WENV170082517
CDZY01056743
338147
Bacillota
CTC
Glu
>WENV170081248
CDZY01010254
235150
Bacillota
TGC
Ala
>WENV170081681
CDZY01024171
235150
Bacillota
TGC
Ala
>WENV170081795
CDZY01028626
235150
Bacillota
TGC
Ala
>WENV170082049
CDZY01036826
235150
Bacillota
TGC
Ala
>WENV170082528
CDZY01057255
235150
Bacillota
TGC
Ala
>WENV170081441
CDZY01016012
293599
Bacillota
CTT
Lys
>WENV170081526
CDZY01018708
293599
Bacillota
CTT
Lys
>WENV170082420
CDZY01052882
429429
Bacillota
CCA
Trp
>WENV170082429
CDZY01053341
429429
Bacillota
CCA
Trp
>WENV170081296
CDZY01011348
313454
Bacillota
GAA
Phe
>WENV170082474
CDZY01054673
313454
Bacillota
GAA
Phe
>WENV170081967
CDZY01033605
44859
Bacillota
AAG
Leu
>WENV170081752
CDZY01026802
16834
Bacillota
GCT
Ser
>WENV170081324
CDZY01011441
11034
Bacillota
GGA
Ser
>WENV170081109
CDZY01004995
235117
Bacillota
TAC
Val
>WENV170081909
CDZY01032642
274189
Bacillota
TGT
Thr
>WENV170081072
CDZY01003311
235079
Bacillota
GAA
Phe
>WENV170081094
CDZY01003727
235079
Bacillota
GAA
Phe
>WENV170081347
CDZY01012806
296878
Bacillota
GTT
Asn
>WENV170082043
CDZY01036670
296878
Bacillota
GTT
Asn
>WENV170082446
CDZY01053769
173314
Bacillota
GAT
Ile
>WENV170081325
CDZY01011767
243612
Bacillota
TAC
Val
>WENV170081260
CDZY01010869
149041
Bacillota
GTC
Asp
>WENV170082427
CDZY01053047
338149
Bacillota
CTC
Glu
>WENV170081021
CDZY01000957
271471
Bacillota
GCC
Gly
>WENV170082398
CDZY01052760
245298
Bacillota
CGG
Pro
>WENV170081821
CDZY01029441
37269
Bacillota
TGA
Ser
>WENV170081295
CDZY01011348
169968
Bacillota
CAT
Met
>WENV170081468
CDZY01017274
169968
Bacillota
CAT
Met
>WENV170081965
CDZY01033594
147135
Bacillota
ACG
Arg
>WENV170081835
CDZY01030260
153911
Bacillota
GAT
Ile
>WENV170081824
CDZY01029472
100326
Bacillota
GTA
Tyr
>WENV170082386
CDZY01052240
100326
Bacillota
GTA
Tyr
>WENV170081398
CDZY01014316
144610
Bacillota
GTG
His
>WENV170081512
CDZY01018435
411547
Bacillota
CTG
Gln
>WENV170082178
CDZY01042560
411547
Bacillota
CTG
Gln
>WENV170082261
CDZY01045693
411547
Bacillota
CTG
Gln
>WENV170082397
CDZY01052760
411547
Bacillota
CTG
Gln
>WENV170082356
CDZY01050886
4624
Bacillota
GCT
Ser
>WENV170081018
CDZY01000957
263765
Bacillota
TAC
Val
>WENV170081413
CDZY01015107
263765
Bacillota
TAC
Val
>WENV170082143
CDZY01040774
263765
Bacillota
TAC
Val
>WENV170082226
CDZY01044805
263765
Bacillota
TAC
Val
>WENV170082295
CDZY01047165
313104
Bacillota
TAC
Val
>WENV170081185
CDZY01007854
248683
Bacillota
TTT
Lys
>WENV170081476
CDZY01017571
18852
Bacillota
GCT
Ser
>WENV170081092
CDZY01003690
235095
Bacillota
GGT
Thr
>WENV170081223
CDZY01009439
235095
Bacillota
GGT
Thr
>WENV170082065
CDZY01037321
235095
Bacillota
GGT
Thr
>WENV170082086
CDZY01037729
235095
Bacillota
GGT
Thr
>WENV170081622
CDZY01022370
194150
Bacillota
TGG
Pro
>WENV170081735
CDZY01026290
419639
Bacillota
GCA
Cys
>WENV170081218
CDZY01009372
411549
Bacillota
TTG
Gln
>WENV170081683
CDZY01024186
411549
Bacillota
TTG
Gln
>WENV170082500
CDZY01056237
411549
Bacillota
TTG
Gln
>WENV170081454
CDZY01016402
235142
Bacillota
CTT
Lys
>WENV170082159
CDZY01041724
235142
Bacillota
CTT
Lys
>WENV170082489
CDZY01055786
245386
Bacillota
CCA
Trp
>WENV170081655
CDZY01023355
148188
Bacillota
CCG
Arg
>WENV170081862
CDZY01031237
148188
Bacillota
CCG
Arg
>WENV170082020
CDZY01035886
235197
Bacillota
GTC
Asp
>WENV170082388
CDZY01052379
235197
Bacillota
GTC
Asp
>WENV170082042
CDZY01036670
368876
Bacillota
GCC
Gly
>WENV170082390
CDZY01052379
368876
Bacillota
GCC
Gly
>WENV170082092
CDZY01037809
163943
Bacillota
GTC
Asp
>WENV170081434
CDZY01015590
235124
Bacillota
TGG
Pro
>WENV170081015
CDZY01000623
338129
Bacillota
TGT
Thr
>WENV170081374
CDZY01013731
243613
Bacillota
GTG
His
>WENV170082444
CDZY01053698
144583
Bacillota
ACG
Arg
>WENV170081695
CDZY01025030
144652
Bacillota
GTC
Asp
>WENV170081221
CDZY01009439
235171
Bacillota
CCA
Trp
>WENV170081090
CDZY01003690
235171
Bacillota
CCA
Trp
>WENV170082348
CDZY01050042
238974
Bacillota
GAA
Phe
>WENV170082349
CDZY01050145
144621
Bacillota
GTT
Asn
>WENV170081041
CDZY01001903
235113
Bacillota
GAA
Phe
>WENV170082046
CDZY01036736
152491
Bacillota
CAT
Met
>WENV170081375
CDZY01013755
243098
Bacillota
GGT
Thr
>WENV170081432
CDZY01015532
243098
Bacillota
GGT
Thr
>WENV170082104
CDZY01038873
243098
Bacillota
GGT
Thr
>WENV170082452
CDZY01053837
243098
Bacillota
GGT
Thr
>WENV170081640
CDZY01023345
58712
Bacillota
CAG
Leu
>WENV170081682
CDZY01024182
58712
Bacillota
CAG
Leu
>WENV170081196
CDZY01008371
58712
Bacillota
CAG
Leu
>WENV170081089
CDZY01003408
245296
Bacillota
CCC
Gly
>WENV170081464
CDZY01017171
245296
Bacillota
CCC
Gly
>WENV170082152
CDZY01041207
272992
Bacillota
CTT
Lys
>WENV170081541
CDZY01019190
344240
Bacillota
GCC
Gly
>WENV170081734
CDZY01026290
344240
Bacillota
GCC
Gly
>WENV170082097
CDZY01038329
344240
Bacillota
GCC
Gly
>WENV170082045
CDZY01036736
281472
Bacillota
GGT
Thr
>WENV170081408
CDZY01014695
196632
Bacillota
GTC
Asp
>WENV170081540
CDZY01019190
196632
Bacillota
GTC
Asp
>WENV170081732
CDZY01026290
196632
Bacillota
GTC
Asp
>WENV170081008
CDZY01000416
178024
Bacillota
TCT
Arg
>WENV170081624
CDZY01022370
178024
Bacillota
TCT
Arg
>WENV170081037
CDZY01001880
144594
Bacillota
CAC
Val
>WENV170081138
CDZY01006023
144594
Bacillota
CAC
Val
>WENV170081875
CDZY01032190
144594
Bacillota
CAC
Val
>WENV170081963
CDZY01033546
144594
Bacillota
CAC
Val
>WENV170082365
CDZY01051388
95563
Bacillota
GTA
Tyr
>WENV170081985
CDZY01034872
413657
Bacillota
CCC
Gly
>WENV170082191
CDZY01043481
413657
Bacillota
CCC
Gly
>WENV170081469
CDZY01017274
272488
Bacillota
GAA
Phe
>WENV170081654
CDZY01023355
338128
Bacillota
TTC
Glu
>WENV170082194
CDZY01043535
338128
Bacillota
TTC
Glu
>WENV170081409
CDZY01014695
245344
Bacillota
GAA
Phe
>WENV170081733
CDZY01026290
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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