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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170083569
CEAA01037643
119661
Verrucomicrobiota
CAA
Leu
>WENV170082983
CEAA01016261
155256
Verrucomicrobiota
TCT
Arg
>WENV170082982
CEAA01016261
246701
Verrucomicrobiota
TTT
Lys
>WENV170083400
CEAA01031390
345141
Verrucomicrobiota
TTG
Gln
>WENV170083661
CEAA01040935
345133
Verrucomicrobiota
GAC
Val
>WENV170083258
CEAA01028435
82054
Verrucomicrobiota
GTA
Tyr
>WENV170082789
CEAA01008986
246677
Verrucomicrobiota
CTT
Lys
>WENV170082790
CEAA01008986
246677
Verrucomicrobiota
CTT
Lys
>WENV170082791
CEAA01008986
246677
Verrucomicrobiota
CTT
Lys
>WENV170083862
CEAA01048592
344844
Verrucomicrobiota
GCA
Cys
>WENV170083571
CEAA01037643
155264
Verrucomicrobiota
GGG
Pro
>WENV170082895
CEAA01012378
344845
Verrucomicrobiota
CTG
Gln
>WENV170082894
CEAA01012378
128202
Verrucomicrobiota
GTC
Asp
>WENV170082936
CEAA01013689
128202
Verrucomicrobiota
GTC
Asp
>WENV170083283
CEAA01028785
414625
Verrucomicrobiota
CCC
Gly
>WENV170083009
CEAA01017163
46246
Verrucomicrobiota
TGA
Ser
>WENV170083570
CEAA01037643
97755
Verrucomicrobiota
TAG
Leu
>WENV170083011
CEAA01017163
246700
Verrucomicrobiota
TTC
Glu
>WENV170083863
CEAA01048592
246700
Verrucomicrobiota
TTC
Glu
>WENV170083865
CEAA01048592
246687
Verrucomicrobiota
CGC
Ala
>WENV170083284
CEAA01028785
419909
Verrucomicrobiota
TCC
Gly
>WENV170083858
CEAA01048112
344841
Verrucomicrobiota
CAC
Val
>WENV170083994
CEAA01053338
60880
Verrucomicrobiota
CAG
Leu
>WENV170083575
CEAA01037643
82056
Verrucomicrobiota
TAA
Leu
>WENV170082788
CEAA01008986
344842
Verrucomicrobiota
CGT
Thr
>WENV170083879
CEAA01049001
170105
Verrucomicrobiota
CAT
Met
>WENV170083035
CEAA01018060
287733
Verrucomicrobiota
CCA
Trp
>WENV170083864
CEAA01048592
345123
Verrucomicrobiota
TGT
Thr
>WENV170083574
CEAA01037643
345110
Verrucomicrobiota
CCT
Arg
>WENV170083012
CEAA01017163
344839
Verrucomicrobiota
GTG
His
>WENV170083441
CEAA01033212
7274
Verrucomicrobiota
CGA
Ser
>WENV170083576
CEAA01037643
246260
Verrucomicrobiota
>WENV170082787
CEAA01008986
155268
Verrucomicrobiota
CGG
Pro
>WENV170083861
CEAA01048592
82181
Verrucomicrobiota
AAG
Leu
>WENV170083572
CEAA01037643
246728
Verrucomicrobiota
GAA
Phe
>WENV170083577
CEAA01037643
7256
Verrucomicrobiota
GCT
Ser
>WENV170083014
CEAA01017163
345115
Verrucomicrobiota
CAT
Met
>WENV170083926
CEAA01050677
345119
Verrucomicrobiota
TAC
Val
>WENV170083257
CEAA01028435
345124
Verrucomicrobiota
GTT
Asn
>WENV170082935
CEAA01013689
17023
Verrucomicrobiota
GGA
Ser
>WENV170082962
CEAA01014986
368497
Verrucomicrobiota
GCC
Gly
>WENV170083010
CEAA01017163
368497
Verrucomicrobiota
GCC
Gly
>WENV170083669
CEAA01041344
345142
Verrucomicrobiota
CCG
Arg
>WENV170083013
CEAA01017163
246709
Verrucomicrobiota
CAT
Met
>WENV170083573
CEAA01037643
154693
Verrucomicrobiota
TGG
Pro
>WENV170083034
CEAA01018060
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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