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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170111233
CECF01066754
16842
Bacillota
CGA
Ser
>WENV170110185
CECF01014810
155113
Bacillota
CGG
Pro
>WENV170110770
CECF01043433
144612
Bacillota
TCT
Arg
>WENV170111013
CECF01055613
144612
Bacillota
TCT
Arg
>WENV170110848
CECF01047055
156189
Bacillota
GAT
Ile
>WENV170110820
CECF01046020
235098
Bacillota
GAC
Val
>WENV170110938
CECF01052299
148239
Bacillota
TCT
Arg
>WENV170111065
CECF01058054
44854
Bacillota
TGA
Ser
>WENV170111269
CECF01068366
44854
Bacillota
TGA
Ser
>WENV170110695
CECF01039652
338147
Bacillota
CTC
Glu
>WENV170110705
CECF01040619
338147
Bacillota
CTC
Glu
>WENV170111110
CECF01060672
338147
Bacillota
CTC
Glu
>WENV170110230
CECF01016836
235150
Bacillota
TGC
Ala
>WENV170110846
CECF01046777
235114
Bacillota
TTT
Lys
>WENV170111029
CECF01056350
11034
Bacillota
GGA
Ser
>WENV170110939
CECF01052299
156937
Bacillota
GTG
His
>WENV170111016
CECF01056006
274189
Bacillota
TGT
Thr
>WENV170111244
CECF01066840
274189
Bacillota
TGT
Thr
>WENV170109942
CECF01003917
274189
Bacillota
TGT
Thr
>WENV170109979
CECF01006106
274189
Bacillota
TGT
Thr
>WENV170110418
CECF01026567
274189
Bacillota
TGT
Thr
>WENV170110254
CECF01017605
295714
Bacillota
GCC
Gly
>WENV170110472
CECF01030068
295714
Bacillota
GCC
Gly
>WENV170110739
CECF01042340
235087
Bacillota
TGC
Ala
>WENV170111189
CECF01064428
173314
Bacillota
GAT
Ile
>WENV170110213
CECF01015900
271471
Bacillota
GCC
Gly
>WENV170111039
CECF01056668
169968
Bacillota
CAT
Met
>WENV170110663
CECF01038559
413152
Bacillota
TCC
Gly
>WENV170110176
CECF01013991
411547
Bacillota
CTG
Gln
>WENV170110993
CECF01054747
411547
Bacillota
CTG
Gln
>WENV170110301
CECF01020225
263765
Bacillota
TAC
Val
>WENV170111213
CECF01065703
235095
Bacillota
GGT
Thr
>WENV170109905
CECF01002254
411549
Bacillota
TTG
Gln
>WENV170110747
CECF01042742
411549
Bacillota
TTG
Gln
>WENV170111234
CECF01066800
148188
Bacillota
CCG
Arg
>WENV170109923
CECF01003378
163943
Bacillota
GTC
Asp
>WENV170110084
CECF01009848
163943
Bacillota
GTC
Asp
>WENV170111190
CECF01064459
241432
Bacillota
TGT
Thr
>WENV170110401
CECF01025564
338129
Bacillota
TGT
Thr
>WENV170110145
CECF01012937
144621
Bacillota
GTT
Asn
>WENV170110527
CECF01032464
144621
Bacillota
GTT
Asn
>WENV170110575
CECF01033850
144621
Bacillota
GTT
Asn
>WENV170111087
CECF01059460
144621
Bacillota
GTT
Asn
>WENV170110916
CECF01050966
277200
Bacillota
GGC
Ala
>WENV170109996
CECF01006870
243098
Bacillota
GGT
Thr
>WENV170109962
CECF01005487
248965
Bacillota
GCC
Gly
>WENV170110496
CECF01030935
248965
Bacillota
GCC
Gly
>WENV170111188
CECF01064428
299139
Bacillota
TGC
Ala
>WENV170110149
CECF01013083
144594
Bacillota
CAC
Val
>WENV170110767
CECF01043401
95563
Bacillota
GTA
Tyr
>WENV170111040
CECF01056668
272488
Bacillota
GAA
Phe
>WENV170110650
CECF01037897
273862
Bacillota
TGC
Ala
>WENV170109883
CECF01001205
338128
Bacillota
TTC
Glu
>WENV170109913
CECF01002841
338128
Bacillota
TTC
Glu
>WENV170110266
CECF01018156
338128
Bacillota
TTC
Glu
>WENV170110806
CECF01045348
338128
Bacillota
TTC
Glu
>WENV170110914
CECF01050666
338128
Bacillota
TTC
Glu
>WENV170111108
CECF01060634
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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