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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170112540
CEGF01002690
350432
Gammaproteobacteria
GTG
His
>WENV170112683
CEGF01012714
237766
Gammaproteobacteria
TAC
Val
>WENV170112479
CEGF01000890
147160
Gammaproteobacteria
ACG
Arg
>WENV170112550
CEGF01002915
158396
Gammaproteobacteria
ACG
Arg
>WENV170112551
CEGF01002915
158396
Gammaproteobacteria
ACG
Arg
>WENV170112552
CEGF01002915
158396
Gammaproteobacteria
ACG
Arg
>WENV170112541
CEGF01002695
152460
Gammaproteobacteria
GGG
Pro
>WENV170112596
CEGF01005582
95985
Gammaproteobacteria
TAG
Leu
>WENV170112536
CEGF01002643
283840
Gammaproteobacteria
TTC
Glu
>WENV170112555
CEGF01003143
283840
Gammaproteobacteria
TTC
Glu
>WENV170112557
CEGF01003276
199984
Gammaproteobacteria
CAT
Met
>WENV170112558
CEGF01003293
199984
Gammaproteobacteria
CAT
Met
>WENV170112593
CEGF01005580
199984
Gammaproteobacteria
CAT
Met
>WENV170112594
CEGF01005581
199984
Gammaproteobacteria
CAT
Met
>WENV170112477
CEGF01000889
47425
Gammaproteobacteria
GGA
Ser
>WENV170112499
CEGF01001682
147114
Gammaproteobacteria
CCT
Arg
>WENV170112680
CEGF01012000
147114
Gammaproteobacteria
CCT
Arg
>WENV170112681
CEGF01012509
147114
Gammaproteobacteria
CCT
Arg
>WENV170112692
CEGF01015028
147114
Gammaproteobacteria
CCT
Arg
>WENV170112451
CEGF01000143
301997
Gammaproteobacteria
TTC
Glu
>WENV170112462
CEGF01000360
301997
Gammaproteobacteria
TTC
Glu
>WENV170112587
CEGF01005245
145196
Gammaproteobacteria
CAT
Met
>WENV170112691
CEGF01014996
235452
Gammaproteobacteria
GAA
Phe
>WENV170112650
CEGF01009098
59172
Gammaproteobacteria
CAA
Leu
>WENV170112515
CEGF01002036
240619
Gammaproteobacteria
TGT
Thr
>WENV170112484
CEGF01001035
159514
Gammaproteobacteria
TGG
Pro
>WENV170112610
CEGF01006090
159514
Gammaproteobacteria
TGG
Pro
>WENV170112698
CEGF01016376
237425
Gammaproteobacteria
TTC
Glu
>WENV170112512
CEGF01002035
174801
Gammaproteobacteria
TGG
Pro
>WENV170112478
CEGF01000890
6976
Gammaproteobacteria
GCT
Ser
>WENV170112474
CEGF01000882
52727
Gammaproteobacteria
GGA
Ser
>WENV170112537
CEGF01002673
289927
Gammaproteobacteria
GAA
Phe
>WENV170112546
CEGF01002734
158933
Gammaproteobacteria
CAT
Met
>WENV170112517
CEGF01002036
412476
Gammaproteobacteria
TCC
Gly
>WENV170112579
CEGF01004642
268812
Gammaproteobacteria
GTT
Asn
>WENV170112580
CEGF01004642
268812
Gammaproteobacteria
GTT
Asn
>WENV170112581
CEGF01004642
268812
Gammaproteobacteria
GTT
Asn
>WENV170112630
CEGF01007922
268812
Gammaproteobacteria
GTT
Asn
>WENV170112493
CEGF01001358
147118
Gammaproteobacteria
GAC
Val
>WENV170112655
CEGF01009207
147118
Gammaproteobacteria
GAC
Val
>WENV170112677
CEGF01011775
147118
Gammaproteobacteria
GAC
Val
>WENV170112626
CEGF01007486
346720
Gammaproteobacteria
TCC
Gly
>WENV170112589
CEGF01005282
113688
Gammaproteobacteria
GTA
Tyr
>WENV170112689
CEGF01014612
113688
Gammaproteobacteria
GTA
Tyr
>WENV170112644
CEGF01008683
16396
Gammaproteobacteria
TGA
Ser
>WENV170112503
CEGF01001912
148452
Gammaproteobacteria
CCT
Arg
>WENV170112531
CEGF01002563
241136
Gammaproteobacteria
TTG
Gln
>WENV170112595
CEGF01005582
147123
Gammaproteobacteria
CAT
Met
>WENV170112636
CEGF01008173
235886
Gammaproteobacteria
TTC
Glu
>WENV170112694
CEGF01015424
412230
Gammaproteobacteria
GCA
Cys
>WENV170112472
CEGF01000855
45459
Gammaproteobacteria
GGA
Ser
>WENV170112688
CEGF01014569
240082
Gammaproteobacteria
TTT
Lys
>WENV170112538
CEGF01002690
146807
Gammaproteobacteria
TCT
Arg
>WENV170112690
CEGF01014920
243921
Gammaproteobacteria
TTT
Lys
>WENV170112597
CEGF01005582
339623
Gammaproteobacteria
TTG
Gln
>WENV170112598
CEGF01005582
339623
Gammaproteobacteria
TTG
Gln
>WENV170112614
CEGF01006660
147120
Gammaproteobacteria
CGG
Pro
>WENV170112533
CEGF01002627
237438
Gammaproteobacteria
GAA
Phe
>WENV170112682
CEGF01012588
237438
Gammaproteobacteria
GAA
Phe
>WENV170112509
CEGF01002033
245151
Gammaproteobacteria
GTG
His
>WENV170112511
CEGF01002034
245151
Gammaproteobacteria
GTG
His
>WENV170112576
CEGF01004167
411735
Gammaproteobacteria
GCA
Cys
>WENV170112489
CEGF01001241
147117
Gammaproteobacteria
GTC
Asp
>WENV170112491
CEGF01001241
147117
Gammaproteobacteria
GTC
Asp
>WENV170112647
CEGF01008923
147117
Gammaproteobacteria
GTC
Asp
>WENV170112649
CEGF01008923
147117
Gammaproteobacteria
GTC
Asp
>WENV170112665
CEGF01010476
147117
Gammaproteobacteria
GTC
Asp
>WENV170112666
CEGF01010476
147117
Gammaproteobacteria
GTC
Asp
>WENV170112668
CEGF01010476
147117
Gammaproteobacteria
GTC
Asp
>WENV170112620
CEGF01007239
163580
Gammaproteobacteria
GAC
Val
>WENV170112599
CEGF01005582
59175
Gammaproteobacteria
CAG
Leu
>WENV170112675
CEGF01011226
59175
Gammaproteobacteria
CAG
Leu
>WENV170112612
CEGF01006601
147328
Gammaproteobacteria
CCG
Arg
>WENV170112613
CEGF01006602
147328
Gammaproteobacteria
CCG
Arg
>WENV170112616
CEGF01007179
158083
Gammaproteobacteria
ACG
Arg
>WENV170112617
CEGF01007179
158083
Gammaproteobacteria
ACG
Arg
>WENV170112661
CEGF01009926
158083
Gammaproteobacteria
ACG
Arg
>WENV170112662
CEGF01009926
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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