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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170114695
CENF01213817
165001
Bacteroidota
GTT
Asn
>WENV170114324
CENF01174017
237361
Bacteroidota
TTG
Gln
>WENV170113249
CENF01050952
236125
Bacteroidota
GAA
Phe
>WENV170113199
CENF01045817
127458
Bacteroidota
GAC
Val
>WENV170114845
CENF01220017
127458
Bacteroidota
GAC
Val
>WENV170113044
CENF01030811
270933
Bacteroidota
CAT
Met
>WENV170113079
CENF01033005
60611
Bacteroidota
GCT
Ser
>WENV170114923
CENF01284932
96678
Bacteroidota
TAG
Leu
>WENV170114017
CENF01135618
273242
Bacteroidota
CCA
Trp
>WENV170114429
CENF01189199
273242
Bacteroidota
CCA
Trp
>WENV170114016
CENF01135617
60695
Bacteroidota
GCT
Ser
>WENV170114488
CENF01194398
60695
Bacteroidota
GCT
Ser
>WENV170112899
CENF01019377
127414
Bacteroidota
TGG
Pro
>WENV170113467
CENF01072154
127414
Bacteroidota
TGG
Pro
>WENV170113670
CENF01092209
127414
Bacteroidota
TGG
Pro
>WENV170113880
CENF01118378
127414
Bacteroidota
TGG
Pro
>WENV170114028
CENF01137378
127414
Bacteroidota
TGG
Pro
>WENV170114413
CENF01186698
127414
Bacteroidota
TGG
Pro
>WENV170114838
CENF01219930
127414
Bacteroidota
TGG
Pro
>WENV170113956
CENF01128435
190649
Bacteroidota
GTT
Asn
>WENV170114498
CENF01195422
190649
Bacteroidota
GTT
Asn
>WENV170114584
CENF01204627
190649
Bacteroidota
GTT
Asn
>WENV170115043
CENF01376460
343033
Bacteroidota
TTC
Glu
>WENV170112761
CENF01005837
44938
Bacteroidota
TGA
Ser
>WENV170113643
CENF01089360
17987
Bacteroidota
GGA
Ser
>WENV170114490
CENF01194813
17496
Bacteroidota
GGA
Ser
>WENV170112805
CENF01009693
246641
Bacteroidota
GAA
Phe
>WENV170112870
CENF01016969
246641
Bacteroidota
GAA
Phe
>WENV170114088
CENF01145823
246641
Bacteroidota
GAA
Phe
>WENV170114329
CENF01174604
246641
Bacteroidota
GAA
Phe
>WENV170114452
CENF01190845
246641
Bacteroidota
GAA
Phe
>WENV170112929
CENF01021366
165044
Bacteroidota
GTG
His
>WENV170112736
CENF01003120
145555
Bacteroidota
GTC
Asp
>WENV170112934
CENF01021815
145555
Bacteroidota
GTC
Asp
>WENV170113088
CENF01033716
145555
Bacteroidota
GTC
Asp
>WENV170113342
CENF01059403
145555
Bacteroidota
GTC
Asp
>WENV170113152
CENF01042228
153768
Bacteroidota
TGC
Ala
>WENV170112882
CENF01018228
185921
Bacteroidota
GTC
Asp
>WENV170113224
CENF01047766
185921
Bacteroidota
GTC
Asp
>WENV170114206
CENF01159479
48382
Bacteroidota
TGA
Ser
>WENV170112925
CENF01021284
127449
Bacteroidota
TAC
Val
>WENV170114916
CENF01274953
179613
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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