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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170115889
CENG01058365
364406
Alphaproteobacteria
GCC
Gly
>WENV170115262
CENG01006626
267922
Alphaproteobacteria
CCA
Trp
>WENV170115937
CENG01064444
267922
Alphaproteobacteria
CCA
Trp
>WENV170115602
CENG01032923
113700
Alphaproteobacteria
>WENV170116344
CENG01113389
339454
Alphaproteobacteria
>WENV170115776
CENG01046833
345376
Alphaproteobacteria
GAC
Val
>WENV170115981
CENG01070226
339722
Alphaproteobacteria
TTG
Gln
>WENV170115640
CENG01035838
161002
Alphaproteobacteria
GTG
His
>WENV170116672
CENG01196175
368915
Alphaproteobacteria
GGT
Thr
>WENV170115314
CENG01011747
254522
Alphaproteobacteria
GAA
Phe
>WENV170115580
CENG01030351
242540
Alphaproteobacteria
TGC
Ala
>WENV170115563
CENG01028613
359842
Alphaproteobacteria
GAC
Val
>WENV170116151
CENG01089816
359842
Alphaproteobacteria
GAC
Val
>WENV170115927
CENG01063309
241518
Alphaproteobacteria
CCA
Trp
>WENV170115463
CENG01021875
160158
Alphaproteobacteria
GAT
Ile
>WENV170116489
CENG01125076
266073
Alphaproteobacteria
TTT
Lys
>WENV170116146
CENG01089163
369678
Alphaproteobacteria
GGT
Thr
>WENV170115431
CENG01019710
412424
Alphaproteobacteria
TCC
Gly
>WENV170115470
CENG01022018
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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