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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170117276
CENJ01002634
237421
Gammaproteobacteria
TGT
Thr
>WENV170117281
CENJ01002690
16396
Gammaproteobacteria
TGA
Ser
>WENV170117491
CENJ01013584
128930
Gammaproteobacteria
GTC
Asp
>WENV170117593
CENJ01019061
412799
Gammaproteobacteria
GCA
Cys
>WENV170117637
CENJ01020736
240642
Gammaproteobacteria
GTT
Asn
>WENV170117660
CENJ01022257
412799
Gammaproteobacteria
GCA
Cys
>WENV170117661
CENJ01022257
59979
Gammaproteobacteria
TAA
Leu
>WENV170117771
CENJ01028776
411766
Gammaproteobacteria
GCA
Cys
>WENV170117869
CENJ01034453
244202
Gammaproteobacteria
TTT
Lys
>WENV170117973
CENJ01039870
260238
Gammaproteobacteria
>WENV170118023
CENJ01042087
154268
Gammaproteobacteria
ACG
Arg
>WENV170118034
CENJ01042597
240642
Gammaproteobacteria
GTT
Asn
>WENV170118163
CENJ01048115
238510
Gammaproteobacteria
GCC
Gly
>WENV170118172
CENJ01048959
145491
Gammaproteobacteria
GGG
Pro
>WENV170118269
CENJ01055377
260238
Gammaproteobacteria
>WENV170118298
CENJ01057259
236248
Gammaproteobacteria
TTT
Lys
>WENV170118337
CENJ01059768
260238
Gammaproteobacteria
>WENV170118590
CENJ01076096
146662
Gammaproteobacteria
GAC
Val
>WENV170118661
CENJ01081223
252289
Gammaproteobacteria
TTT
Lys
>WENV170118712
CENJ01084728
236480
Gammaproteobacteria
GTG
His
>WENV170118725
CENJ01085448
260238
Gammaproteobacteria
>WENV170118799
CENJ01089982
96672
Gammaproteobacteria
TAG
Leu
>WENV170118812
CENJ01090894
237421
Gammaproteobacteria
TGT
Thr
>WENV170118816
CENJ01090955
61925
Gammaproteobacteria
TAA
Leu
>WENV170118961
CENJ01101879
171935
Gammaproteobacteria
ACG
Arg
>WENV170119065
CENJ01108822
151889
Gammaproteobacteria
CAT
Met
>WENV170119069
CENJ01109365
145261
Gammaproteobacteria
CAT
Met
>WENV170119374
CENJ01136673
243485
Gammaproteobacteria
TGT
Thr
>WENV170119421
CENJ01140936
149035
Gammaproteobacteria
CCG
Arg
>WENV170119600
CENJ01153987
45411
Gammaproteobacteria
GGA
Ser
>WENV170119602
CENJ01154184
273942
Gammaproteobacteria
GCC
Gly
>WENV170119787
CENJ01164000
165387
Gammaproteobacteria
CCT
Arg
>WENV170119936
CENJ01170692
17426
Gammaproteobacteria
GCT
Ser
>WENV170119964
CENJ01171623
163492
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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