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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121034
CENL01039769
237493
Alphaproteobacteria
CCA
Trp
>WENV170120882
CENL01014575
237489
Alphaproteobacteria
CAT
Met
>WENV170121048
CENL01041134
113700
Alphaproteobacteria
>WENV170120930
CENL01024621
176908
Alphaproteobacteria
GTC
Asp
>WENV170121313
CENL01105042
237867
Alphaproteobacteria
TTT
Lys
>WENV170121030
CENL01039436
338282
Alphaproteobacteria
GTT
Asn
>WENV170120845
CENL01009327
368245
Alphaproteobacteria
>WENV170121049
CENL01041307
368245
Alphaproteobacteria
>WENV170121001
CENL01036538
254188
Alphaproteobacteria
CCA
Trp
>WENV170121277
CENL01097898
82652
Alphaproteobacteria
GTA
Tyr
>WENV170120991
CENL01034445
25760
Alphaproteobacteria
CGA
Ser
>WENV170121067
CENL01043748
150677
Alphaproteobacteria
GTC
Asp
>WENV170121171
CENL01054589
339722
Alphaproteobacteria
TTG
Gln
>WENV170121029
CENL01039436
147334
Alphaproteobacteria
CAT
Met
>WENV170121105
CENL01050543
150172
Alphaproteobacteria
ACG
Arg
>WENV170120924
CENL01024042
28682
Alphaproteobacteria
GGA
Ser
>WENV170120843
CENL01009181
339725
Alphaproteobacteria
GAA
Phe
>WENV170121000
CENL01036137
192195
Alphaproteobacteria
GTC
Asp
>WENV170120842
CENL01009132
23672
Alphaproteobacteria
GCT
Ser
>WENV170120961
CENL01029054
23672
Alphaproteobacteria
GCT
Ser
>WENV170120928
CENL01024447
340106
Alphaproteobacteria
GCC
Gly
>WENV170120999
CENL01035906
167926
Alphaproteobacteria
CAT
Met
>WENV170120818
CENL01006377
254522
Alphaproteobacteria
GAA
Phe
>WENV170120771
CENL01002299
237281
Alphaproteobacteria
CGT
Thr
>WENV170121077
CENL01045913
147877
Alphaproteobacteria
GTG
His
>WENV170121040
CENL01040323
163860
Alphaproteobacteria
GGG
Pro
>WENV170121338
CENL01113252
424918
Alphaproteobacteria
TCC
Gly
>WENV170121165
CENL01054539
339609
Alphaproteobacteria
GGT
Thr
>WENV170121173
CENL01054623
236256
Alphaproteobacteria
TAC
Val
>WENV170121157
CENL01054280
147286
Alphaproteobacteria
CGG
Pro
>WENV170121243
CENL01080422
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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