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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170123146
CENO01022296
34696
Alphaproteobacteria
GGA
Ser
>WENV170123139
CENO01021857
144964
Alphaproteobacteria
TGG
Pro
>WENV170123083
CENO01018168
176908
Alphaproteobacteria
GTC
Asp
>WENV170123877
CENO01085355
282595
Alphaproteobacteria
CCA
Trp
>WENV170122998
CENO01011618
338282
Alphaproteobacteria
GTT
Asn
>WENV170123014
CENO01013077
339722
Alphaproteobacteria
TTG
Gln
>WENV170123582
CENO01056367
242540
Alphaproteobacteria
TGC
Ala
>WENV170122979
CENO01009973
266073
Alphaproteobacteria
TTT
Lys
>WENV170123182
CENO01024557
266073
Alphaproteobacteria
TTT
Lys
>WENV170123482
CENO01047295
266073
Alphaproteobacteria
TTT
Lys
>WENV170123607
CENO01058642
266073
Alphaproteobacteria
TTT
Lys
>WENV170123609
CENO01058797
266073
Alphaproteobacteria
TTT
Lys
>WENV170123594
CENO01057762
412424
Alphaproteobacteria
TCC
Gly
>WENV170123391
CENO01039751
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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