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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170129344
CENQ01084935
149985
Alphaproteobacteria
ACG
Arg
>WENV170128822
CENQ01036920
23468
Alphaproteobacteria
GCT
Ser
>WENV170128625
CENQ01019633
176908
Alphaproteobacteria
GTC
Asp
>WENV170129698
CENQ01123661
435528
Alphaproteobacteria
GCA
Cys
>WENV170129660
CENQ01119963
421153
Alphaproteobacteria
>WENV170128917
CENQ01045544
338282
Alphaproteobacteria
GTT
Asn
>WENV170129645
CENQ01118442
200119
Alphaproteobacteria
CAT
Met
>WENV170130442
CENQ01301276
339722
Alphaproteobacteria
TTG
Gln
>WENV170129221
CENQ01072426
283763
Alphaproteobacteria
TGC
Ala
>WENV170129498
CENQ01102030
258175
Alphaproteobacteria
CGC
Ala
>WENV170129521
CENQ01105092
161002
Alphaproteobacteria
GTG
His
>WENV170129324
CENQ01083557
266073
Alphaproteobacteria
TTT
Lys
>WENV170129385
CENQ01089423
266073
Alphaproteobacteria
TTT
Lys
>WENV170129248
CENQ01074800
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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