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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170128506
CENQ01010565
202944
Gammaproteobacteria
TGG
Pro
>WENV170128609
CENQ01018639
313881
Gammaproteobacteria
GGC
Ala
>WENV170128670
CENQ01023766
240642
Gammaproteobacteria
GTT
Asn
>WENV170128799
CENQ01034853
313881
Gammaproteobacteria
GGC
Ala
>WENV170128957
CENQ01048513
145713
Gammaproteobacteria
CAT
Met
>WENV170129032
CENQ01055985
322642
Gammaproteobacteria
GGT
Thr
>WENV170129328
CENQ01083771
322642
Gammaproteobacteria
GGT
Thr
>WENV170129342
CENQ01084794
322642
Gammaproteobacteria
GGT
Thr
>WENV170129485
CENQ01100323
322642
Gammaproteobacteria
GGT
Thr
>WENV170129615
CENQ01116001
245151
Gammaproteobacteria
GTG
His
>WENV170129678
CENQ01121646
244202
Gammaproteobacteria
TTT
Lys
>WENV170129794
CENQ01131493
73305
Gammaproteobacteria
TAA
Leu
>WENV170129863
CENQ01135908
128930
Gammaproteobacteria
GTC
Asp
>WENV170130153
CENQ01207059
147647
Gammaproteobacteria
CAT
Met
>WENV170130316
CENQ01272926
243485
Gammaproteobacteria
TGT
Thr
>WENV170130345
CENQ01283407
270709
Gammaproteobacteria
GTG
His
>WENV170130368
CENQ01290610
199268
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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