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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170131700
CENT01001168
313881
Gammaproteobacteria
GGC
Ala
>WENV170132303
CENT01057110
147779
Gammaproteobacteria
CAT
Met
>WENV170131930
CENT01017940
149035
Gammaproteobacteria
CCG
Arg
>WENV170131850
CENT01011264
145260
Gammaproteobacteria
CAT
Met
>WENV170131757
CENT01004983
185163
Gammaproteobacteria
ACG
Arg
>WENV170131758
CENT01004983
185163
Gammaproteobacteria
ACG
Arg
>WENV170132781
CENT01120420
240642
Gammaproteobacteria
GTT
Asn
>WENV170131828
CENT01009917
149036
Gammaproteobacteria
CCA
Trp
>WENV170132081
CENT01033536
149036
Gammaproteobacteria
CCA
Trp
>WENV170132229
CENT01049863
149036
Gammaproteobacteria
CCA
Trp
>WENV170132451
CENT01072973
149036
Gammaproteobacteria
CCA
Trp
>WENV170132796
CENT01126622
264949
Gammaproteobacteria
GGC
Ala
>WENV170131885
CENT01014299
412799
Gammaproteobacteria
GCA
Cys
>WENV170131840
CENT01010835
340801
Gammaproteobacteria
CCT
Arg
>WENV170132047
CENT01030057
340801
Gammaproteobacteria
CCT
Arg
>WENV170132275
CENT01054502
59830
Gammaproteobacteria
CAA
Leu
>WENV170132324
CENT01058391
250885
Gammaproteobacteria
TGC
Ala
>WENV170132162
CENT01042748
151889
Gammaproteobacteria
CAT
Met
>WENV170132119
CENT01039515
154796
Gammaproteobacteria
TCT
Arg
>WENV170132775
CENT01118941
23669
Gammaproteobacteria
GCT
Ser
>WENV170132364
CENT01063165
149037
Gammaproteobacteria
GAC
Val
>WENV170131703
CENT01001282
198797
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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