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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170139480
CENX01014120
165001
Bacteroidota
GTT
Asn
>WENV170140086
CENX01054507
165001
Bacteroidota
GTT
Asn
>WENV170140773
CENX01118028
165001
Bacteroidota
GTT
Asn
>WENV170142182
CENX01403677
126691
Bacteroidota
TGG
Pro
>WENV170139316
CENX01002554
430187
Bacteroidota
GCA
Cys
>WENV170140789
CENX01120365
430187
Bacteroidota
GCA
Cys
>WENV170140566
CENX01097677
338625
Bacteroidota
TTC
Glu
>WENV170139391
CENX01008982
236125
Bacteroidota
GAA
Phe
>WENV170140402
CENX01082624
364423
Bacteroidota
GGT
Thr
>WENV170140765
CENX01116795
414401
Bacteroidota
GCA
Cys
>WENV170139747
CENX01030858
96678
Bacteroidota
TAG
Leu
>WENV170140397
CENX01082301
96678
Bacteroidota
TAG
Leu
>WENV170141847
CENX01213600
96678
Bacteroidota
TAG
Leu
>WENV170139401
CENX01009416
127414
Bacteroidota
TGG
Pro
>WENV170140978
CENX01139587
127414
Bacteroidota
TGG
Pro
>WENV170141743
CENX01210410
127414
Bacteroidota
TGG
Pro
>WENV170140834
CENX01124485
242524
Bacteroidota
GCC
Gly
>WENV170140437
CENX01085999
190649
Bacteroidota
GTT
Asn
>WENV170140494
CENX01090609
190649
Bacteroidota
GTT
Asn
>WENV170141071
CENX01148723
190649
Bacteroidota
GTT
Asn
>WENV170141267
CENX01172620
343033
Bacteroidota
TTC
Glu
>WENV170139390
CENX01008856
290994
Bacteroidota
CAT
Met
>WENV170140048
CENX01050770
290994
Bacteroidota
CAT
Met
>WENV170140567
CENX01097827
290994
Bacteroidota
CAT
Met
>WENV170141586
CENX01200820
290994
Bacteroidota
CAT
Met
>WENV170140394
CENX01081969
17496
Bacteroidota
GGA
Ser
>WENV170139886
CENX01039911
148135
Bacteroidota
GGG
Pro
>WENV170140742
CENX01115063
193627
Bacteroidota
TCT
Arg
>WENV170141589
CENX01201429
193627
Bacteroidota
TCT
Arg
>WENV170141097
CENX01152062
165044
Bacteroidota
GTG
His
>WENV170141692
CENX01207621
145555
Bacteroidota
GTC
Asp
>WENV170139308
CENX01001777
185921
Bacteroidota
GTC
Asp
>WENV170140840
CENX01125016
185921
Bacteroidota
GTC
Asp
>WENV170141039
CENX01144769
185921
Bacteroidota
GTC
Asp
>WENV170141590
CENX01201493
185921
Bacteroidota
GTC
Asp
>WENV170141843
CENX01213514
185921
Bacteroidota
GTC
Asp
>WENV170140342
CENX01076965
193473
Bacteroidota
GTC
Asp
>WENV170140606
CENX01101192
193473
Bacteroidota
GTC
Asp
>WENV170141561
CENX01198913
193473
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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