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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170142127
CENX01381258
171935
Gammaproteobacteria
ACG
Arg
>WENV170142117
CENX01376737
59658
Gammaproteobacteria
CAA
Leu
>WENV170139625
CENX01023280
145713
Gammaproteobacteria
CAT
Met
>WENV170141197
CENX01164491
145713
Gammaproteobacteria
CAT
Met
>WENV170140884
CENX01130125
151889
Gammaproteobacteria
CAT
Met
>WENV170142200
CENX01409222
269248
Gammaproteobacteria
CCA
Trp
>WENV170141068
CENX01148290
340801
Gammaproteobacteria
CCT
Arg
>WENV170139408
CENX01009666
241230
Gammaproteobacteria
GAA
Phe
>WENV170141862
CENX01213756
241230
Gammaproteobacteria
GAA
Phe
>WENV170141172
CENX01160925
163882
Gammaproteobacteria
GAC
Val
>WENV170141067
CENX01148137
149037
Gammaproteobacteria
GAC
Val
>WENV170142066
CENX01354599
412799
Gammaproteobacteria
GCA
Cys
>WENV170140171
CENX01062526
426403
Gammaproteobacteria
GCA
Cys
>WENV170139517
CENX01016771
411766
Gammaproteobacteria
GCA
Cys
>WENV170142079
CENX01360455
20025
Gammaproteobacteria
GGA
Ser
>WENV170141556
CENX01198342
52727
Gammaproteobacteria
GGA
Ser
>WENV170141181
CENX01162437
45152
Gammaproteobacteria
GGA
Ser
>WENV170139811
CENX01033718
190809
Gammaproteobacteria
GGG
Pro
>WENV170140240
CENX01068021
190809
Gammaproteobacteria
GGG
Pro
>WENV170140533
CENX01094085
190809
Gammaproteobacteria
GGG
Pro
>WENV170141066
CENX01147863
190809
Gammaproteobacteria
GGG
Pro
>WENV170139631
CENX01023752
61925
Gammaproteobacteria
TAA
Leu
>WENV170140497
CENX01090761
250885
Gammaproteobacteria
TGC
Ala
>WENV170140627
CENX01103781
250885
Gammaproteobacteria
TGC
Ala
>WENV170140910
CENX01132758
250885
Gammaproteobacteria
TGC
Ala
>WENV170141913
CENX01241806
250885
Gammaproteobacteria
TGC
Ala
>WENV170139324
CENX01002989
237421
Gammaproteobacteria
TGT
Thr
>WENV170141330
CENX01178497
245602
Gammaproteobacteria
TTT
Lys
>WENV170142186
CENX01404656
252289
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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