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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170144376
CENY01147091
165250
Alphaproteobacteria
TGG
Pro
>WENV170144932
CENY01171880
365250
Alphaproteobacteria
GCC
Gly
>WENV170143593
CENY01082277
339737
Alphaproteobacteria
GAC
Val
>WENV170145157
CENY01263202
268154
Alphaproteobacteria
TGT
Thr
>WENV170143932
CENY01110424
58865
Alphaproteobacteria
GAG
Leu
>WENV170145456
CENY01342560
237489
Alphaproteobacteria
CAT
Met
>WENV170143530
CENY01078215
66752
Alphaproteobacteria
CAG
Leu
>WENV170143935
CENY01110650
113700
Alphaproteobacteria
>WENV170144184
CENY01132227
23468
Alphaproteobacteria
GCT
Ser
>WENV170143325
CENY01063701
146875
Alphaproteobacteria
GTG
His
>WENV170143769
CENY01095702
176908
Alphaproteobacteria
GTC
Asp
>WENV170142463
CENY01010315
339724
Alphaproteobacteria
TTG
Gln
>WENV170145446
CENY01341401
421153
Alphaproteobacteria
>WENV170143758
CENY01094566
82652
Alphaproteobacteria
GTA
Tyr
>WENV170145166
CENY01268418
339722
Alphaproteobacteria
TTG
Gln
>WENV170143557
CENY01080391
339725
Alphaproteobacteria
GAA
Phe
>WENV170144268
CENY01139564
258175
Alphaproteobacteria
CGC
Ala
>WENV170143510
CENY01076766
167926
Alphaproteobacteria
CAT
Met
>WENV170143152
CENY01052278
364533
Alphaproteobacteria
GCC
Gly
>WENV170143308
CENY01062774
359842
Alphaproteobacteria
GAC
Val
>WENV170144463
CENY01153250
412281
Alphaproteobacteria
CTG
Gln
>WENV170142675
CENY01021977
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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