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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170155535
CEOG01037727
252328
Alphaproteobacteria
TTT
Lys
>WENV170155677
CEOG01089969
306070
Alphaproteobacteria
CCA
Trp
>WENV170155686
CEOG01094200
113700
Alphaproteobacteria
>WENV170155703
CEOG01099542
254188
Alphaproteobacteria
CCA
Trp
>WENV170155623
CEOG01074892
162801
Alphaproteobacteria
GTG
His
>WENV170155732
CEOG01104762
80918
Alphaproteobacteria
GAG
Leu
>WENV170155240
CEOG01004419
147334
Alphaproteobacteria
CAT
Met
>WENV170155607
CEOG01071419
157999
Alphaproteobacteria
TCT
Arg
>WENV170155593
CEOG01066560
74116
Alphaproteobacteria
CAG
Leu
>WENV170155183
CEOG01000625
175748
Alphaproteobacteria
CAT
Met
>WENV170155437
CEOG01030121
283763
Alphaproteobacteria
TGC
Ala
>WENV170155436
CEOG01030025
159395
Alphaproteobacteria
GTC
Asp
>WENV170155420
CEOG01028700
113716
Alphaproteobacteria
CAA
Leu
>WENV170155541
CEOG01037805
147361
Alphaproteobacteria
GGG
Pro
>WENV170155605
CEOG01070773
28682
Alphaproteobacteria
GGA
Ser
>WENV170155294
CEOG01012045
23672
Alphaproteobacteria
GCT
Ser
>WENV170155361
CEOG01019825
289655
Alphaproteobacteria
GGC
Ala
>WENV170155639
CEOG01079304
412477
Alphaproteobacteria
GCA
Cys
>WENV170155326
CEOG01016455
377327
Alphaproteobacteria
GCC
Gly
>WENV170155629
CEOG01076849
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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