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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170156758
CEOJ01010803
27877
Alphaproteobacteria
GGA
Ser
>WENV170156873
CEOJ01018137
160158
Alphaproteobacteria
GAT
Ile
>WENV170156875
CEOJ01018175
266073
Alphaproteobacteria
TTT
Lys
>WENV170156925
CEOJ01021839
161002
Alphaproteobacteria
GTG
His
>WENV170157010
CEOJ01027345
348781
Alphaproteobacteria
GAA
Phe
>WENV170157071
CEOJ01032501
279830
Alphaproteobacteria
TAC
Val
>WENV170157095
CEOJ01034769
281594
Alphaproteobacteria
TGT
Thr
>WENV170157188
CEOJ01041160
241518
Alphaproteobacteria
CCA
Trp
>WENV170157210
CEOJ01043344
412424
Alphaproteobacteria
TCC
Gly
>WENV170157346
CEOJ01054216
163860
Alphaproteobacteria
GGG
Pro
>WENV170157429
CEOJ01060192
149985
Alphaproteobacteria
ACG
Arg
>WENV170157637
CEOJ01078209
338282
Alphaproteobacteria
GTT
Asn
>WENV170157727
CEOJ01088376
163860
Alphaproteobacteria
GGG
Pro
>WENV170157760
CEOJ01091553
163860
Alphaproteobacteria
GGG
Pro
>WENV170157763
CEOJ01091880
339722
Alphaproteobacteria
TTG
Gln
>WENV170157908
CEOJ01104649
144964
Alphaproteobacteria
TGG
Pro
>WENV170157980
CEOJ01109789
163860
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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