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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170161264
CEOK01213685
165250
Alphaproteobacteria
TGG
Pro
>WENV170159313
CEOK01056108
149985
Alphaproteobacteria
ACG
Arg
>WENV170159354
CEOK01058645
34696
Alphaproteobacteria
GGA
Ser
>WENV170158941
CEOK01028138
306070
Alphaproteobacteria
CCA
Trp
>WENV170160289
CEOK01131148
306070
Alphaproteobacteria
CCA
Trp
>WENV170158469
CEOK01001252
113700
Alphaproteobacteria
>WENV170160463
CEOK01146923
338282
Alphaproteobacteria
GTT
Asn
>WENV170161198
CEOK01198313
200119
Alphaproteobacteria
CAT
Met
>WENV170159161
CEOK01045511
340288
Alphaproteobacteria
GCC
Gly
>WENV170160234
CEOK01126727
249928
Alphaproteobacteria
TAC
Val
>WENV170158824
CEOK01021253
276379
Alphaproteobacteria
TGC
Ala
>WENV170158518
CEOK01003473
342876
Alphaproteobacteria
GAC
Val
>WENV170159710
CEOK01085212
340106
Alphaproteobacteria
GCC
Gly
>WENV170160189
CEOK01123028
254522
Alphaproteobacteria
GAA
Phe
>WENV170159557
CEOK01073950
242540
Alphaproteobacteria
TGC
Ala
>WENV170159066
CEOK01038265
348781
Alphaproteobacteria
GAA
Phe
>WENV170158768
CEOK01017644
163860
Alphaproteobacteria
GGG
Pro
>WENV170160360
CEOK01137202
279830
Alphaproteobacteria
TAC
Val
>WENV170158473
CEOK01001375
266073
Alphaproteobacteria
TTT
Lys
>WENV170161407
CEOK01301206
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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