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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170159063
CEOK01037794
146662
Gammaproteobacteria
GAC
Val
>WENV170159785
CEOK01090714
312287
Gammaproteobacteria
TGT
Thr
>WENV170160375
CEOK01138661
163492
Gammaproteobacteria
TGG
Pro
>WENV170159690
CEOK01082961
279385
Gammaproteobacteria
TTT
Lys
>WENV170159691
CEOK01082961
279385
Gammaproteobacteria
TTT
Lys
>WENV170159070
CEOK01038525
236480
Gammaproteobacteria
GTG
His
>WENV170160025
CEOK01110250
236480
Gammaproteobacteria
GTG
His
>WENV170159921
CEOK01102128
249887
Gammaproteobacteria
GGT
Thr
>WENV170160398
CEOK01140705
244202
Gammaproteobacteria
TTT
Lys
>WENV170160910
CEOK01182629
61925
Gammaproteobacteria
TAA
Leu
>WENV170159444
CEOK01064713
269248
Gammaproteobacteria
CCA
Trp
>WENV170160755
CEOK01173987
181949
Gammaproteobacteria
CAT
Met
>WENV170160104
CEOK01116228
154268
Gammaproteobacteria
ACG
Arg
>WENV170158962
CEOK01029934
240642
Gammaproteobacteria
GTT
Asn
>WENV170159607
CEOK01077378
322642
Gammaproteobacteria
GGT
Thr
>WENV170160021
CEOK01110013
322642
Gammaproteobacteria
GGT
Thr
>WENV170160713
CEOK01170766
426403
Gammaproteobacteria
GCA
Cys
>WENV170159826
CEOK01094213
199268
Gammaproteobacteria
ACG
Arg
>WENV170160754
CEOK01173846
199268
Gammaproteobacteria
ACG
Arg
>WENV170159978
CEOK01107245
252289
Gammaproteobacteria
TTT
Lys
>WENV170160852
CEOK01179232
294663
Gammaproteobacteria
TTC
Glu
>WENV170158504
CEOK01002942
319098
Gammaproteobacteria
TAC
Val
>WENV170159707
CEOK01084807
311863
Gammaproteobacteria
GGC
Ala
>WENV170159848
CEOK01096543
195303
Gammaproteobacteria
GAT
Ile
>WENV170159245
CEOK01051369
145491
Gammaproteobacteria
GGG
Pro
>WENV170159792
CEOK01091198
243485
Gammaproteobacteria
TGT
Thr
>WENV170159500
CEOK01068477
237421
Gammaproteobacteria
TGT
Thr
>WENV170159659
CEOK01080956
237421
Gammaproteobacteria
TGT
Thr
>WENV170159350
CEOK01058214
411735
Gammaproteobacteria
GCA
Cys
>WENV170160058
CEOK01112796
411735
Gammaproteobacteria
GCA
Cys
>WENV170158915
CEOK01026886
190809
Gammaproteobacteria
GGG
Pro
>WENV170159933
CEOK01103311
190809
Gammaproteobacteria
GGG
Pro
>WENV170160338
CEOK01135198
190809
Gammaproteobacteria
GGG
Pro
>WENV170159869
CEOK01098262
150183
Gammaproteobacteria
CCG
Arg
>WENV170159639
CEOK01079499
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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