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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162110
CEOM01003994
149985
Alphaproteobacteria
ACG
Arg
>WENV170162227
CEOM01012052
113700
Alphaproteobacteria
>WENV170162254
CEOM01014327
340106
Alphaproteobacteria
GCC
Gly
>WENV170162269
CEOM01016155
412424
Alphaproteobacteria
TCC
Gly
>WENV170162299
CEOM01018068
339722
Alphaproteobacteria
TTG
Gln
>WENV170162309
CEOM01019187
167926
Alphaproteobacteria
CAT
Met
>WENV170162456
CEOM01032433
235430
Alphaproteobacteria
TTT
Lys
>WENV170162787
CEOM01064597
23561
Alphaproteobacteria
GGA
Ser
>WENV170162945
CEOM01079547
338282
Alphaproteobacteria
GTT
Asn
>WENV170163138
CEOM01099276
338282
Alphaproteobacteria
GTT
Asn
>WENV170163151
CEOM01100135
254522
Alphaproteobacteria
GAA
Phe
>WENV170163269
CEOM01115545
348781
Alphaproteobacteria
GAA
Phe
>WENV170163287
CEOM01116680
82948
Alphaproteobacteria
CAA
Leu
>WENV170163307
CEOM01119259
241518
Alphaproteobacteria
CCA
Trp
>WENV170163316
CEOM01120171
342846
Alphaproteobacteria
GAC
Val
>WENV170163395
CEOM01127770
163860
Alphaproteobacteria
GGG
Pro
>WENV170163455
CEOM01133498
163860
Alphaproteobacteria
GGG
Pro
>WENV170163477
CEOM01135725
342846
Alphaproteobacteria
GAC
Val
>WENV170163830
CEOM01178734
149985
Alphaproteobacteria
ACG
Arg
>WENV170163933
CEOM01189674
167926
Alphaproteobacteria
CAT
Met
>WENV170163958
CEOM01191683
23468
Alphaproteobacteria
GCT
Ser
>WENV170163962
CEOM01192207
167926
Alphaproteobacteria
CAT
Met
>WENV170164002
CEOM01194486
339722
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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